RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 C5P01031 1676 aa11□□□□□ -0.65
NUP50-214ENST00000469163 LRRC37A3O60309 1634 aa11□□□□□ -0.65
NUP50-214ENST00000469163 SORBS3O60504 671 aa11□□□□□ -0.65
NUP50-214ENST00000469163 WDHD1O75717 1129 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 PARP1P09874 1014 aaKnown RBP11□□□□□ -0.65
NUP50-214ENST00000469163 CCDC175P0C221 793 aa11□□□□□ -0.65
NUP50-214ENST00000469163 FERP16591 822 aa11□□□□□ -0.65
NUP50-214ENST00000469163 TAL1P17542 331 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 GNGT1P63211 74 aa11□□□□□ -0.65
NUP50-214ENST00000469163 UBE3CQ15386 1083 aa11□□□□□ -0.65
NUP50-214ENST00000469163 SAFBQ15424 915 aaKnown RBP eCLIP11□□□□□ -0.65
NUP50-214ENST00000469163 ZFPM1Q8IX07 1006 aa11□□□□□ -0.65
NUP50-214ENST00000469163 RIN2Q8WYP3 895 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 PGBD1Q96JS3 809 aa11□□□□□ -0.65
NUP50-214ENST00000469163 DHRS1Q96LJ7 313 aa11□□□□□ -0.65
NUP50-214ENST00000469163 MTA3Q9BTC8 594 aa11□□□□□ -0.65
NUP50-214ENST00000469163 NRAPQ86VF7 1730 aa11□□□□□ -0.65
NUP50-214ENST00000469163 E2F6O75461 281 aa11□□□□□ -0.65
NUP50-214ENST00000469163 TUBB4AP04350 444 aa11□□□□□ -0.65
NUP50-214ENST00000469163 CPXCR1Q8N123 301 aa11□□□□□ -0.65
NUP50-214ENST00000469163 TAF4BQ92750 862 aa11□□□□□ -0.65
NUP50-214ENST00000469163 CSRNP1Q96S65 589 aa11□□□□□ -0.65
NUP50-214ENST00000469163 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 SDF4Q9BRK5 362 aa11□□□□□ -0.65
NUP50-214ENST00000469163 DCP1AQ9NPI6 582 aaPredicted RBP11□□□□□ -0.65
NUP50-214ENST00000469163 UTP6Q9NYH9 597 aaKnown RBP11□□□□□ -0.65
NUP50-214ENST00000469163 BAIAP2L1Q9UHR4 511 aa11□□□□□ -0.65
NUP50-214ENST00000469163 ABCC6O95255 1503 aa11□□□□□ -0.65
NUP50-214ENST00000469163 TAF1P21675 1872 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 DOT1LQ8TEK3 1739 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 KCTD1Q719H9 257 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 CCDC80Q76M96 950 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 HOOK2Q96ED9 719 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 RNF41Q9H4P4 317 aaPredicted RBP10.99□□□□□ -0.65
NUP50-214ENST00000469163 PKD2L1Q9P0L9 805 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 MYH14Q7Z406 1995 aaKnown RBP10.99□□□□□ -0.65
NUP50-214ENST00000469163 ATRNO75882 1429 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 DESP17661 470 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 CDC25BP30305 580 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 NLRP5P59047 1200 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 IFT88Q13099 833 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 CYB5D1Q6P9G0 228 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 IQCF2Q8IXL9 164 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 CCDC13Q8IYE1 715 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 CAPS2Q9BXY5 557 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 FHDC1Q9C0D6 1143 aaPredicted RBP10.99□□□□□ -0.65
NUP50-214ENST00000469163 TAOK3Q9H2K8 898 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 DACT1Q9NYF0 836 aa10.99□□□□□ -0.65
NUP50-214ENST00000469163 PSMD14O00487 310 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 ATP2C2O75185 946 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 CNGA1P29973 690 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 PDIA3P30101 505 aaKnown RBP10.98□□□□□ -0.65
NUP50-214ENST00000469163 GCLCP48506 637 aaPredicted RBP10.98□□□□□ -0.65
NUP50-214ENST00000469163 GSTO1P78417 241 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 CFAP100Q494V2 611 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 NME8Q8N427 588 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 TMEM87AQ8NBN3 555 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 FAM167BQ9BTA0 163 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 DSCC1Q9BVC3 393 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 L1RE1Q9UN81 338 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 PXDNLA1KZ92 1463 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 KRT38O76015 456 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 SSRP1Q08945 709 aaKnown RBP10.98□□□□□ -0.65
NUP50-214ENST00000469163 TTC30AQ86WT1 665 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
NUP50-214ENST00000469163 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.98□□□□□ -0.65
NUP50-214ENST00000469163 RABL2AQ9UBK7 228 aaPredicted RBP10.98□□□□□ -0.65
NUP50-214ENST00000469163 RIC1Q4ADV7 1423 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 ZNF202O95125 648 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 CRKP46108 304 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 FBXO33Q7Z6M2 555 aa10.98□□□□□ -0.65
NUP50-214ENST00000469163 CCDC47Q96A33 483 aaKnown RBP10.98□□□□□ -0.65
NUP50-214ENST00000469163 PLEKHA8P1O95397 391 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 ZSCAN22P10073 491 aaPredicted RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 ABL2P42684 1182 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 ADCY1Q08828 1119 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 PLS1Q14651 629 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 CCDC92Q53HC0 331 aaPredicted RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 CERS5Q8N5B7 392 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 STAMQ92783 540 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 KRT23Q9C075 422 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 ZNHIT6Q9NWK9 470 aaKnown RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 RNF181Q9P0P0 153 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 PKD1L3Q7Z443 1732 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 LRRC10BA6NIK2 292 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 B4DLN1 442 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 SMNDC1O75940 238 aaKnown RBP eCLIP10.97□□□□□ -0.65
NUP50-214ENST00000469163 CTCFP49711 727 aaPredicted RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 POLE2P56282 527 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 DEUP1Q05D60 604 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 CDC37Q16543 378 aaPredicted RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 SP8Q8IXZ3 490 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 PRMT6Q96LA8 375 aaPredicted RBP10.97□□□□□ -0.65
NUP50-214ENST00000469163 GDAP1L1Q96MZ0 367 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
NUP50-214ENST00000469163 RHBDL2Q9NX52 303 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms