RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 B4DLN1 442 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 IPO7O95373 1038 aaKnown RBP15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 ZBED6P86452 979 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 GRIK5Q16478 980 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 SLC35G1Q2M3R5 365 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 PAPD7Q5XG87 772 aaKnown RBP15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 IQCDQ96DY2 449 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 DYNLL2Q96FJ2 89 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 PSMD1Q99460 953 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 DUSP9Q99956 384 aaKnown RBP15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 SAR1BQ9Y6B6 198 aa15.85■□□□□ 0.13
SMARCD3-205ENST00000469154 EIF3CLB5ME19 914 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 LDHBP07195 334 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 PLCG1P19174 1290 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 USP14P54578 494 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 SLC4A8Q2Y0W8 1093 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 MFSD14BQ5SR56 506 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 ZNF444Q8N0Y2 327 aaPredicted RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 FAM71BQ8TC56 605 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 EIF3CQ99613 913 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 C7orf25Q9BPX7 421 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 KCNQ5Q9NR82 932 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 CWC15Q9P013 229 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 VPS18Q9P253 973 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 USP17L3A6NCW0 530 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 USP17L4A6NCW7 530 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 CYTH3O43739 400 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 BAG3O95817 575 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 LMAN1P49257 510 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 PDE4DQ08499 809 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 COBLL1Q53SF7 1204 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 HSP90B2PQ58FF3 399 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 USP17L1Q7RTZ2 530 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 GOLGA5Q8TBA6 731 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 SH3RF3Q8TEJ3 882 aaPredicted RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 CNOT6LQ96LI5 555 aaKnown RBP15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 PLIN2Q99541 437 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 SPZ1Q9BXG8 430 aa15.84■□□□□ 0.13
SMARCD3-205ENST00000469154 DDX60LQ5H9U9 1706 aaKnown RBP15.83■□□□□ 0.13
SMARCD3-205ENST00000469154 BRCA1P38398 1863 aaKnown RBP15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 A0A1W2PQJ5 194 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ANO9A1A5B4 782 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ECE2O60344 883 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ATP1A1P05023 1023 aaKnown RBP15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 CDK17Q00537 523 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 AMPD3Q01432 767 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ORC2Q13416 577 aaPredicted RBP15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 NONOQ15233 471 aaKnown RBP eCLIP15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 MAP9Q49MG5 647 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 FIGNQ5HY92 759 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 TMEM47Q9BQJ4 181 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 TRIM9Q9C026 710 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ZMYND12Q9H0C1 365 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 VIPAS39Q9H9C1 493 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 TARSL2A2RTX5 802 aaKnown RBP15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 MTIF2P46199 727 aaKnown RBP15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 GYS2P54840 703 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ASIC1P78348 528 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 TBC1D8BQ0IIM8 1120 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ZSCAN26Q16670 478 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 LRRC15Q8TF66 581 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 ZNF287Q9HBT7 754 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 C6orf50Q9HD87 102 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 MED4Q9NPJ6 270 aa15.83■□□□□ 0.12
SMARCD3-205ENST00000469154 TULP2O00295 520 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 NAPAP54920 295 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 PPP4CP60510 307 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 CNNM4Q6P4Q7 775 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 ERGIC2Q96RQ1 377 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 MXD3Q9BW11 206 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 TSGA10Q9BZW7 698 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 NHEJ1Q9H9Q4 299 aaPredicted RBP15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 SUGCTQ9HAC7 445 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 ENC1O14682 589 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 LDHCP07864 332 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 ANKRD40Q6AI12 368 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 ZSCAN29Q8IWY8 852 aaPredicted RBP15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 TBC1D22AQ8WUA7 517 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 PCMTD1Q96MG8 357 aaPredicted RBP15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 SYT17Q9BSW7 474 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 NOC4LQ9BVI4 516 aaKnown RBP15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 TAOK3Q9H2K8 898 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 HDAC6Q9UBN7 1215 aa15.82■□□□□ 0.12
SMARCD3-205ENST00000469154 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 CCNT1O60563 726 aaKnown RBP15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 GNA11P29992 359 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 NEK8Q86SG6 692 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 CERS3Q8IU89 383 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 PURBQ96QR8 312 aaKnown RBP15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 MMS19Q96T76 1030 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 FAN1Q9Y2M0 1017 aa15.81■□□□□ 0.12
SMARCD3-205ENST00000469154 RASSF10A6NK89 507 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 NFKBIEO00221 500 aa15.8■□□□□ 0.12
SMARCD3-205ENST00000469154 RASA1P20936 1047 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms