RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 USP17L15C9J2P7 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L13C9JLJ4 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L11C9JVI0 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L18D6R9N7 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L22D6RA61 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L17D6RBQ6 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L19D6RCP7 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L20D6RJB6 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 KIF3CO14782 793 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 RPN1P04843 607 aaKnown RBP10.51□□□□□ -0.73
SMC1A-205ENST00000469129 CYP3A4P08684 503 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 PLCG1P19174 1290 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 TECP42680 631 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L24Q0WX57 530 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 STIM1Q13586 685 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 KCNB1Q14721 858 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 Q4G0T1 1027 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 KIAA1755Q5JYT7 1200 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 HAUS3Q68CZ6 603 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 CCDC174Q6PII3 467 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 USP17L6PQ6QN14 398 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 MCF2L2Q86YR7 1114 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 ERMNQ8TAM6 284 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 ENOX1Q8TC92 643 aaKnown RBP10.51□□□□□ -0.73
SMC1A-205ENST00000469129 SNX29Q8TEQ0 813 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 CRYGNQ8WXF5 182 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 TANGO6Q9C0B7 1094 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 TTC12Q9H892 705 aaPredicted RBP10.51□□□□□ -0.73
SMC1A-205ENST00000469129 MYH11P35749 1972 aa10.51□□□□□ -0.73
SMC1A-205ENST00000469129 WDR81Q562E7 1941 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 GLTPD2A6NH11 291 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 PP2D1A8MPX8 630 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 C19orf81C9J6K1 198 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 AP5Z1O43299 807 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 INPP5BP32019 993 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 CIITAP33076 1130 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 SNAP25P60880 206 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 SETQ01105 290 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-205ENST00000469129 MTMR2Q13614 643 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 NCAPHQ15003 741 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 ZNF658Q5TYW1 1059 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-205ENST00000469129 ISM2Q6H9L7 571 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 LDHDQ86WU2 507 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 ZNF280CQ8ND82 737 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 DCPSQ96C86 337 aaKnown RBP10.5□□□□□ -0.73
SMC1A-205ENST00000469129 C12orf42Q96LP6 360 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 FAM20AQ96MK3 541 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 GLIS2Q9BZE0 524 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-205ENST00000469129 KCNMB3Q9NPA1 279 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 KBTBD4Q9NVX7 518 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 MAP3K20Q9NYL2 800 aaKnown RBP10.5□□□□□ -0.73
SMC1A-205ENST00000469129 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-205ENST00000469129 CCPG1Q9ULG6 757 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 PCDHA12Q9UN75 941 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 KIAA1217Q5T5P2 1943 aa10.5□□□□□ -0.73
SMC1A-205ENST00000469129 OPLAHO14841 1288 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 ZBED4O75132 1171 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 FLOT1O75955 427 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 CFBP00751 764 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 PTPRAP18433 802 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 VCAM1P19320 739 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 ZNF76P36508 570 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 EPS15P42566 896 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 BACE1P56817 501 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 GSDMDP57764 484 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 GHRHRQ02643 423 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 CUL4BQ13620 913 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 TMEM119Q4V9L6 283 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 NAALADL2Q58DX5 795 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 SV2BQ7L1I2 683 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 KCTD17Q8N5Z5 321 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 LARP4BQ92615 738 aaKnown RBP10.49□□□□□ -0.73
SMC1A-205ENST00000469129 MAF1Q9H063 256 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 RRAGCQ9HB90 399 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 EXOC1Q9NV70 894 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 IMPACTQ9P2X3 320 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 PPP1R9AQ9ULJ8 1098 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 MYPNQ86TC9 1320 aa10.49□□□□□ -0.73
SMC1A-205ENST00000469129 LCTP09848 1927 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 POTEMA6NI47 508 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 NRDCO43847 1150 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 RHOBTB3O94955 611 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 SERPINC1P01008 464 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 BMP6P22004 513 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 CDC25AP30304 524 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 NF2P35240 595 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 HSD17B4P51659 736 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 OAZ1P54368 228 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 FANCCQ00597 558 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 SPAG1Q07617 926 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 GRB10Q13322 594 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 TPD52L1Q16890 204 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 PRR16Q569H4 304 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 HYIQ5T013 277 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 KRT26Q7Z3Y9 468 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 CCDC84Q86UT8 332 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-205ENST00000469129 SULF1Q8IWU6 871 aa10.48□□□□□ -0.73
SMC1A-205ENST00000469129 SPC24Q8NBT2 197 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms