RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 A0A1W2PRG0 241 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 BICDL2A1A5D9 508 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 WNT10BO00744 389 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 PSMA7O14818 248 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 SLC37A4O43826 429 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 STX10O60499 249 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 EEF1GP26641 437 aaKnown RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 SLC16A2P36021 539 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 CAP2P40123 477 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 TECP42680 631 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 STAT2P52630 851 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 JAG1P78504 1218 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 GHRHRQ02643 423 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 RRP1BQ14684 758 aaKnown RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 CCAR2Q8N163 923 aaKnown RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 ANKRD20A12PQ8NF67 263 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 HAS1Q92839 578 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 CCDC51Q96ER9 411 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 SGIP1Q9BQI5 828 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 NAA15Q9BXJ9 866 aaKnown RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 ANO3Q9BYT9 981 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 MAF1Q9H063 256 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 RANBP17Q9H2T7 1088 aaKnown RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 THAP9Q9H5L6 903 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 VCPKMTQ9H867 229 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 MYOZ2Q9NPC6 264 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 SAMSN1Q9NSI8 373 aaKnown RBP8.55□□□□□ -1.04
COL6A3-208ENST00000468792 FEM1BQ9UK73 627 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 PCDHA12Q9UN75 941 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 RABGAP1Q9Y3P9 1069 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 PAXBP1Q9Y5B6 917 aa8.55□□□□□ -1.04
COL6A3-208ENST00000468792 ABCB11O95342 1321 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 PP2D1A8MPX8 630 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 TCP10L2B9ZVM9 353 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 TMEM232C9JQI7 657 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 FZD9O00144 591 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 ARHGAP6O43182 974 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 GDF11O95390 407 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 TDP2O95551 362 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 FDX1P10109 184 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 MUTP22033 750 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 FECHP22830 423 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 CCNE1P24864 410 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 CDC25AP30304 524 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 TXKP42681 527 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 PRCPP42785 496 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 EHHADHQ08426 723 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 GRB10Q13322 594 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 TRIM14Q14142 442 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 KMT5BQ4FZB7 885 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 UNC13DQ70J99 1090 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 MYRIPQ8NFW9 859 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 RASSF8Q8NHQ8 419 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 NELFBQ8WX92 580 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 LARP4BQ92615 738 aaKnown RBP8.54□□□□□ -1.04
COL6A3-208ENST00000468792 LPAR1Q92633 364 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 RAD54LQ92698 747 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 IQCDQ96DY2 449 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 HOOK2Q96ED9 719 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 PANX2Q96RD6 677 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 BLZF1Q9H2G9 400 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 CREBZFQ9NS37 354 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 BLOC1S4Q9NUP1 217 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 MAP3K20Q9NYL2 800 aaKnown RBP8.54□□□□□ -1.04
COL6A3-208ENST00000468792 PRR12Q9ULL5 1215 aa8.54□□□□□ -1.04
COL6A3-208ENST00000468792 MYH7BA7E2Y1 1941 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 A0A1W2PQC6 194 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 GOLGA6L9A6NEM1 432 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 SPDYE3A6NKU9 549 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 NFKBIEO00221 500 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 DYNC1I1O14576 645 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 PRKCSHP14314 528 aaPredicted RBP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 CASP1P29466 404 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 ARHGAP4P98171 946 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 ARID5BQ14865 1188 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 UBE2SQ16763 222 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 TCP11X2Q5H9J9 407 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 DNTTIP2Q5QJE6 756 aaKnown RBP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 CENPPQ6IPU0 288 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 TTI2Q6NXR4 508 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 FAM114A1Q8IWE2 563 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 TRMT44Q8IYL2 757 aaKnown RBP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 GUF1Q8N442 669 aaKnown RBP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 ETNPPLQ8TBG4 499 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 LRRC15Q8TF66 581 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 CDK5RAP3Q96JB5 506 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 TEPSINQ96N21 525 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 EHMT1Q9H9B1 1298 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 EXOC1Q9NV70 894 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 R3HCC1Q9Y3T6 440 aaKnown RBP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.53□□□□□ -1.04
COL6A3-208ENST00000468792 PITPNM2Q9BZ72 1349 aa8.53□□□□□ -1.04
COL6A3-208ENST00000468792 GOLGB1Q14789 3259 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms