RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PIGSQ96S52 555 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-203ENST00000468565 STARD7Q9NQZ5 370 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 PCDHA1Q9Y5I3 950 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 ELP1O95163 1332 aa16.75■□□□□ 0.27
COL27A1-203ENST00000468565 PNMA6FA0A0J9YX94 578 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 ASGR1P07306 291 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 CALM1P0DP23 149 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 CALM2P0DP24 149 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 CALM3P0DP25 149 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 MAGEA10P43363 369 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-203ENST00000468565 HSD17B4P51659 736 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 GNASQ5JWF2 1037 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 SGMS1Q86VZ5 419 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 HOMER1Q86YM7 354 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 GLT1D1Q96MS3 346 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 LZTS2Q9BRK4 669 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 SPZ1Q9BXG8 430 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 COL20A1Q9P218 1284 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 PRKAG2Q9UGJ0 569 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 OPLAHO14841 1288 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 SLC34A2O95436 690 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 GNAQP50148 359 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 NSUN6Q8TEA1 469 aaKnown RBP16.74■□□□□ 0.27
COL27A1-203ENST00000468565 IWS1Q96ST2 819 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
COL27A1-203ENST00000468565 IRX5P78411 483 aaPredicted RBP16.73■□□□□ 0.27
COL27A1-203ENST00000468565 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
COL27A1-203ENST00000468565 KCNB2Q92953 911 aa16.73■□□□□ 0.27
COL27A1-203ENST00000468565 SNX21Q969T3 373 aa16.73■□□□□ 0.27
COL27A1-203ENST00000468565 TAAR1Q96RJ0 339 aa16.73■□□□□ 0.27
COL27A1-203ENST00000468565 WDR11Q9BZH6 1224 aa16.73■□□□□ 0.27
COL27A1-203ENST00000468565 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 CFBP00751 764 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 FXR1P51114 621 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 EXOSC10Q01780 885 aaKnown RBP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 TLE2Q04725 743 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 FSCN1Q16658 493 aaKnown RBP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 DHX32Q7L7V1 743 aaKnown RBP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 SCFD2Q8WU76 684 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 TOX2Q96NM4 488 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 RMDN3Q96TC7 470 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 PDLIM7Q9NR12 457 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 SLC12A7Q9Y666 1083 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 MYH7BA7E2Y1 1941 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 ZEB2O60315 1214 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 CABYRO75952 493 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
COL27A1-203ENST00000468565 BEX3Q00994 111 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 ANKRD33Q7Z3H0 272 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
COL27A1-203ENST00000468565 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.27
COL27A1-203ENST00000468565 REC8O95072 547 aa16.71■□□□□ 0.27
COL27A1-203ENST00000468565 HSPA4P34932 840 aa16.71■□□□□ 0.27
COL27A1-203ENST00000468565 PPP2R5BQ15173 497 aa16.71■□□□□ 0.27
COL27A1-203ENST00000468565 ADCK5Q3MIX3 580 aa16.71■□□□□ 0.27
COL27A1-203ENST00000468565 TMEM63BQ5T3F8 832 aa16.71■□□□□ 0.27
COL27A1-203ENST00000468565 RRP36Q96EU6 259 aaKnown RBP16.71■□□□□ 0.27
COL27A1-203ENST00000468565 EPB41L2O43491 1005 aaKnown RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 CLTBP09497 229 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 STXBP2Q15833 593 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 LBHD1Q9BQE6 289 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 SCN10AQ9Y5Y9 1956 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 PLEKHA8P1O95397 391 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 PTGS1P23219 599 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 CDK7P50613 346 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 MDM2Q00987 491 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 TTLL4Q14679 1199 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 SRBD1Q8N5C6 995 aaKnown RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 FANCBQ8NB91 859 aa16.7■□□□□ 0.26
COL27A1-203ENST00000468565 UBE2OQ9C0C9 1292 aaKnown RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 PRDM5Q9NQX1 630 aaPredicted RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
COL27A1-203ENST00000468565 GCOM1H8Y6P7 765 aaPredicted RBP16.69■□□□□ 0.26
COL27A1-203ENST00000468565 ARVCFO00192 962 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 PQBP1O60828 265 aaKnown RBP16.69■□□□□ 0.26
COL27A1-203ENST00000468565 POLR2MP0CAP2 368 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 RXRAP19793 462 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 CPT1AP50416 773 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 CXCL17Q6UXB2 119 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 VTI1AQ96AJ9 217 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 SEZ6LQ9BYH1 1024 aa16.69■□□□□ 0.26
COL27A1-203ENST00000468565 DCDC2CA8MYV0 355 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 NR3C2P08235 984 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
COL27A1-203ENST00000468565 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
COL27A1-203ENST00000468565 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 APOA5Q6Q788 366 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 MICU3Q86XE3 530 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 TDHQ8IZJ6 230 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 OR6J1Q8NGC5 347 aa16.68■□□□□ 0.26
COL27A1-203ENST00000468565 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms