RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 UTP4Q969X6 686 aaKnown RBP5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 ELMO3Q96BJ8 720 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 KAZALD1Q96I82 304 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 MYRFLQ96LU7 910 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 SPON2Q9BUD6 331 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 PDGFDQ9GZP0 370 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 NYXQ9GZU5 481 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 SIL1Q9H173 461 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 GSX1Q9H4S2 264 aaPredicted RBP5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 PPP1R9AQ9ULJ8 1098 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 EXOC6BQ9Y2D4 811 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 ACTL7BQ9Y614 415 aa5.02□□□□□ -1.61
TMEM39A-204ENST00000468545 PXDNLA1KZ92 1463 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 UTYO14607 1347 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 COL5A3P25940 1745 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 ANKRD18BA2A2Z9 1011 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 FAM221AA4D161 298 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 GREM1O60565 184 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 CILPO75339 1184 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 ZBTB7AO95365 584 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 MMP10P09238 476 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 ST5P78524 1137 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 DDR1Q08345 913 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 IFIT5Q13325 482 aaKnown RBP5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 MPP2Q14168 576 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 WIPI1Q5MNZ9 446 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 LRFN4Q6PJG9 635 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 DYMQ7RTS9 669 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 HDXQ7Z353 690 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 C16orf71Q8IYS4 520 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 ARMC10Q8N2F6 343 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 CNBD1Q8NA66 436 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 ZNF296Q8WUU4 475 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 PLPPR2Q96GM1 343 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 FANCD2OSQ96PS1 177 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 YIPF2Q9BWQ6 316 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 LRRC3Q9BY71 257 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 LNPKQ9C0E8 428 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 SEMA6BQ9H3T3 888 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 DCTPP1Q9H773 170 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 CCSER2Q9H7U1 834 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 SNCAIPQ9Y6H5 919 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 ARFGEF2Q9Y6D5 1785 aa5.01□□□□□ -1.61
TMEM39A-204ENST00000468545 TNS1Q9HBL0 1735 aaKnown RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 CDHR2Q9BYE9 1310 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 AFDNP55196 1824 aaKnown RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 TAF1LQ8IZX4 1826 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 DCDC2CA8MYV0 355 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 POLRMTO00411 1230 aaKnown RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 DHX15O43143 795 aaKnown RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 CSF1RP07333 972 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 HSP90B1P14625 803 aaKnown RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 USP11P51784 963 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 CTSWP56202 376 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 RING1Q06587 406 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 INPP5AQ14642 412 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 CCDC152Q4G0S7 254 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 LRRC24Q50LG9 513 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 XP32Q5T750 250 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 PRR5LQ6MZQ0 368 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 CYFIP1Q7L576 1253 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 RNF214Q8ND24 703 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 TTLL11Q8NHH1 800 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 SSH3Q8TE77 659 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 TP53INP1Q96A56 240 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 GCC1Q96CN9 775 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 PLA2G12BQ9BX93 195 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 NT5C1AQ9BXI3 368 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 PUS3Q9BZE2 481 aaKnown RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 GREM2Q9H772 168 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 PIDD1Q9HB75 910 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 IL1RAPL2Q9NP60 686 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 DISC1Q9NRI5 854 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 TPSG1Q9NRR2 321 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 FAM105AQ9NUU6 356 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 PPP1R1BQ9UD71 204 aaPredicted RBP5□□□□□ -1.61
TMEM39A-204ENST00000468545 TACC3Q9Y6A5 838 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 NUP98P52948 1817 aa5□□□□□ -1.61
TMEM39A-204ENST00000468545 KDM2BQ8NHM5 1336 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 ZNF831Q5JPB2 1677 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 PRAMEF27A3QJZ7 478 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 GFRA2O00451 464 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 FANCGO15287 622 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 RAB11FIP3O75154 756 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 BMP3P12645 472 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 POLD1P28340 1107 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 IGHMBP2P38935 993 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 ASPAP45381 313 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 RFX5P48382 616 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 CDK8P49336 464 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 TFCP2Q12800 502 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 TTLL4Q14679 1199 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 RABL6Q3YEC7 729 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 SGO2Q562F6 1265 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 HSP90AB4PQ58FF6 505 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 PPM1JQ5JR12 505 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 SLC10A5Q5PT55 438 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms