RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 MAP3K20Q9NYL2 800 aaKnown RBP4.1□□□□□ -1.75
TRIM59-202ENST00000468542 SLC12A7Q9Y666 1083 aa4.1□□□□□ -1.75
TRIM59-202ENST00000468542 KIAA1217Q5T5P2 1943 aa4.1□□□□□ -1.75
TRIM59-202ENST00000468542 WDR81Q562E7 1941 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 MCM3APO60318 1980 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 PDE4DIPQ5VU43 2346 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 CCDC69A6NI79 296 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 SLC15A5A6NIM6 579 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 DDX11L8A8MPP1 907 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 KLRF2D3W0D1 207 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 TNPO2O14787 897 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZBTB5O15062 677 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZBTB24O43167 697 aaPredicted RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZBTB43O43298 467 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 DHX16O60231 1041 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 CNMDO75829 334 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 DXOO77932 396 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 CD46P15529 392 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 CASTP20810 708 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 STAT3P40763 770 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 LBX1P52954 281 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 USP46P62068 366 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 FGD1P98174 961 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 DGKZQ13574 1117 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 GRB14Q14449 540 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 TMEM132BQ14DG7 1078 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 CCDC96Q2M329 555 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 SYDE2Q5VT97 1194 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 NFXL1Q6ZNB6 911 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 OTOP1Q7RTM1 612 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZNF654Q8IZM8 581 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 MSL3Q8N5Y2 521 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 FANCBQ8NB91 859 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 RDH13Q8NBN7 331 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 SNIP1Q8TAD8 396 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 USP6NLQ92738 828 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 COA7Q96BR5 231 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ATG4CQ96DT6 458 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZNF274Q96GC6 653 aaPredicted RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 TBC1D32Q96NH3 1257 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 PSMG3-AS1Q96PY0 264 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZKSCAN3Q9BRR0 538 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 MOV10L1Q9BXT6 1211 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 BACH2Q9BYV9 841 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 R3HDMLQ9H3Y0 253 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 RIOX1Q9H6W3 641 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 EFCC1Q9HA90 598 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 FBXO28Q9NVF7 368 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 SLC5A4Q9NY91 659 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 BTBD7Q9P203 1132 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 SRRDQ9UH36 339 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 NRBP1Q9UHY1 535 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 CPA4Q9UI42 421 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 MAD2L2Q9UI95 211 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 PRR12Q9ULL5 1215 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 DIS3Q9Y2L1 958 aaKnown RBP4.09□□□□□ -1.75
TRIM59-202ENST00000468542 IVNS1ABPQ9Y6Y0 642 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 PFASO15067 1338 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 ZNF536O15090 1300 aa4.09□□□□□ -1.75
TRIM59-202ENST00000468542 BAZ2BQ9UIF8 2168 aaKnown RBP4.09□□□□□ -1.76
TRIM59-202ENST00000468542 RANBP2P49792 3224 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 DNAJC25-GNG10A0A024R161 153 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PNMA6FA0A0J9YX94 578 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 KLF18A0A0U1RQI7 1052 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 RAD21O60216 631 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 CDKL5O76039 1030 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 ABCB11O95342 1321 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 FCER1AP12319 257 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 IFNAR1P17181 557 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 ERCC3P19447 782 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PDIA3P30101 505 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 RGS2P41220 211 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PSMC4P43686 418 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 MCM2P49736 904 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 METAP2P50579 478 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 WNT7BP56706 349 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 IKQ13123 557 aaPredicted RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 MAP2K5Q13163 448 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 TOB2Q14106 344 aaPredicted RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 KCTD2Q14681 263 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 RABEP1Q15276 862 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 RTN1Q16799 776 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 OLFML2BQ68BL8 750 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 SNRNP48Q6IEG0 339 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 FBXO46Q6PJ61 603 aaPredicted RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 CPLX2Q6PUV4 134 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 TMTC3Q6ZXV5 915 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 KCTD1Q719H9 257 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 CHST3Q7LGC8 479 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 GPR142Q7Z601 462 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PLEKHH3Q7Z736 793 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 MCF2L2Q86YR7 1114 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 CCAR1Q8IX12 1150 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 ADGRF4Q8IZF3 695 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 BRF1Q92994 677 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 KIFC2Q96AC6 838 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 ARMC5Q96C12 935 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 RRP36Q96EU6 259 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 TRIM47Q96LD4 638 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 NUP88Q99567 741 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms