RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RRAGCQ9HB90 399 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 A0A0G2JLL6 359 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-208ENST00000468300 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 FAM86B1E9PN63 330 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 LAD1O00515 517 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 NFIBO00712 420 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 FLOT1O75955 427 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 FAM86B2P0C5J1 330 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 DSG3P32926 999 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 PRRT2Q7Z6L0 340 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-208ENST00000468300 IGSF22Q8N9C0 903 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 TSPY26PQ9H489 355 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 RAVER2Q9HCJ3 691 aaKnown RBP9.37□□□□□ -0.91
BRCA1-208ENST00000468300 ZNF214Q9UL59 606 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-208ENST00000468300 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 ABCB11O95342 1321 aa9.37□□□□□ -0.91
BRCA1-208ENST00000468300 POLR2DO15514 142 aaKnown RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 NEMFO60524 1076 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 PRR29P0C7W0 189 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 PPATQ06203 517 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 TYRO3Q06418 890 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 TMEM132BQ14DG7 1078 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 NAALADL2Q58DX5 795 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 PDXDC2PQ6P474 469 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 GLT8D2Q9H1C3 349 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 KCNMB3Q9NPA1 279 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 TUBE1Q9UJT0 475 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 RPTORQ8N122 1335 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 IGLV3-22A0A075B6J6 115 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 SPDYE16A6NNV3 312 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 CYP3A4P08684 503 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 OR52Z1P0C646 297 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 BMP6P22004 513 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 LONP1P36776 959 aaKnown RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 USP11P51784 963 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 GRAMD1CQ8IYS0 662 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 ANKRD13AQ8IZ07 590 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 CYP2W1Q8TAV3 490 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 SPATA20Q8TB22 786 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 ETNPPLQ8TBG4 499 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 TMEM51Q9NW97 253 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 FRMPD4Q14CM0 1322 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 ATP2A1O14983 1001 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 PEX10O60683 326 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 KINO60870 393 aaKnown RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 CIITAP33076 1130 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 SARSP49591 514 aaKnown RBP9.36□□□□□ -0.91
BRCA1-208ENST00000468300 ARHGAP4P98171 946 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 CCPG1Q9ULG6 757 aa9.36□□□□□ -0.91
BRCA1-208ENST00000468300 LRRC37A2A6NM11 1700 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 CTAGE5O15320 804 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 MRE11P49959 708 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 FXR2P51116 673 aaKnown RBP eCLIP9.35□□□□□ -0.91
BRCA1-208ENST00000468300 SPIRE1Q08AE8 756 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 PNOCQ13519 176 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 Q4G0T1 1027 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 GPAT2Q6NUI2 795 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 MOXD1Q6UVY6 613 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 ARMCX6Q7L4S7 300 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 TRPM7Q96QT4 1865 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 HOXA7P31268 230 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-208ENST00000468300 C11orf57Q6ZUT1 292 aaPredicted RBP9.35□□□□□ -0.91
BRCA1-208ENST00000468300 ERO1BQ86YB8 467 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 RBM46Q8TBY0 533 aaKnown RBP9.35□□□□□ -0.91
BRCA1-208ENST00000468300 R3HDMLQ9H3Y0 253 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 NMRK2Q9NPI5 230 aa9.35□□□□□ -0.91
BRCA1-208ENST00000468300 DDX25Q9UHL0 483 aaKnown RBP9.35□□□□□ -0.91
BRCA1-208ENST00000468300 MRPL11Q9Y3B7 192 aaKnown RBP9.35□□□□□ -0.91
BRCA1-208ENST00000468300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-208ENST00000468300 AP5Z1O43299 807 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CNMDO75829 334 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CFBP00751 764 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 TECP42680 631 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 COG2Q14746 738 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 DTHD1Q6ZMT9 781 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 PDILTQ8N807 584 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 OPTNQ96CV9 577 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 OTUD5Q96G74 571 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 NUDT12Q9BQG2 462 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CCSER1Q9C0I3 900 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CSADQ9Y600 493 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 FOSP01100 380 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-208ENST00000468300 PPIL2Q13356 520 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CALCRLQ16602 461 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 ECM1Q16610 540 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CST9Q5W186 159 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 PAGE5Q96GU1 130 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
BRCA1-208ENST00000468300 FAM13BQ9NYF5 915 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 GCOM1H8Y6P7 765 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-208ENST00000468300 ITGBL1O95965 494 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-208ENST00000468300 SLFN14P0C7P3 912 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 POLR2MP0CAP2 368 aa9.34□□□□□ -0.91
BRCA1-208ENST00000468300 GCFC2P16383 781 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms