RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 RBAK-RBAKDNI3L0D1 243 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 ZEB2O60315 1214 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 MYL3P08590 195 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 CCL23P55773 120 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 PPP2R5BQ15173 497 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 CCDC62Q6P9F0 684 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 FBXO11Q86XK2 927 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 SCFD2Q8WU76 684 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 HIPK3Q9H422 1215 aa17.23■□□□□ 0.35
ATPAF2-204ENST00000467560 A6NJR5 290 aa17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 KLRF2D3W0D1 207 aa17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 E7EWF7 191 aa17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 ANTXR2P58335 489 aa17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 PPIGQ13427 754 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 CXXC1Q9P0U4 656 aaPredicted RBP17.22■□□□□ 0.35
ATPAF2-204ENST00000467560 CYP2C9P11712 490 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 EIF2AK2P19525 551 aaKnown RBP17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 PBX2P40425 430 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 CPT1AP50416 773 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 LY6KQ17RY6 165 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 NBPF20Q3BBV1 942 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 SEPT14Q6ZU15 432 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 RUFY2Q8WXA3 655 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 MYLIPQ8WY64 445 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 IL23AQ9NPF7 189 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 POLR3EQ9NVU0 708 aa17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
ATPAF2-204ENST00000467560 SPTBN5Q9NRC6 3674 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 IFIT3O14879 490 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 CYTH3O43739 400 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 CFBP00751 764 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 DNAJB2P25686 324 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 HSD17B4P51659 736 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 TROAPQ12815 778 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 GRM4Q14833 912 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 MAP4K1Q92918 833 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 SCLYQ96I15 445 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 MTG1Q9BT17 334 aaPredicted RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 AMNQ9BXJ7 453 aa17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 MRPL11Q9Y3B7 192 aaKnown RBP17.2■□□□□ 0.34
ATPAF2-204ENST00000467560 ZBTB5O15062 677 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 TRDNQ13061 729 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 TTLL4Q14679 1199 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 GRIN2CQ14957 1233 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 HOMER1Q86YM7 354 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 MB21D2Q8IYB1 491 aaPredicted RBP17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 AFG1LQ8WV93 481 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 PIGSQ96S52 555 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 MPHOSPH6Q99547 160 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 PBX4Q9BYU1 374 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 PXMP2Q9NR77 195 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 CHD7Q9P2D1 2997 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
ATPAF2-204ENST00000467560 BAZ2BQ9UIF8 2168 aaKnown RBP17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 DLL1O00548 723 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 RGS20O76081 388 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 HOXA13P31271 388 aaPredicted RBP17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 GHRHRQ02643 423 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 PSRC1Q6PGN9 363 aaPredicted RBP17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 OTOP2Q7RTS6 562 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 NCOA7Q8NI08 942 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 IL31RAQ8NI17 732 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 IGDCC4Q8TDY8 1250 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 HERVK_113Q902F9 699 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 KAT2BQ92831 832 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 SEZ6LQ9BYH1 1024 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 MAF1Q9H063 256 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 RIOX1Q9H6W3 641 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 DDX41Q9UJV9 622 aaKnown RBP17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 PCDHA1Q9Y5I3 950 aa17.18■□□□□ 0.34
ATPAF2-204ENST00000467560 NR3C2P08235 984 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 MMP3P08254 477 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 WTAPQ15007 396 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 STXBP2Q15833 593 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 FAM47CQ5HY64 1035 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 ARHGEF16Q5VV41 709 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 TIFAQ96CG3 184 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 CTAGE1Q96RT6 745 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 IWS1Q96ST2 819 aa17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 LSG1Q9H089 658 aaKnown RBP17.17■□□□□ 0.34
ATPAF2-204ENST00000467560 MYH6P13533 1939 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 B4DLN1 442 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 FGBP02675 491 aa17.16■□□□□ 0.34
ATPAF2-204ENST00000467560 MRPL12P52815 198 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms