RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 MYOCDQ8IZQ8 938 aa12.24□□□□□ -0.45
HDAC3-203ENST00000467533 STK11IPQ8N1F8 1099 aa12.24□□□□□ -0.45
HDAC3-203ENST00000467533 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
HDAC3-203ENST00000467533 SSH3Q8TE77 659 aa12.24□□□□□ -0.45
HDAC3-203ENST00000467533 TLR9Q9NR96 1032 aa12.24□□□□□ -0.45
HDAC3-203ENST00000467533 PRR23AA6NEV1 266 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 KDM4AO75164 1064 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 AMHP03971 560 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 CT47B1P0C2W7 299 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 BMP3P12645 472 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 LTBRP36941 435 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 STAT2P52630 851 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 MUM1L1Q5H9M0 696 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 FBXO11Q86XK2 927 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 MORC4Q8TE76 937 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 ARHGAP45Q92619 1136 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 DHX38Q92620 1227 aaKnown RBP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 MKNK2Q9HBH9 465 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
HDAC3-203ENST00000467533 SLC4A4Q9Y6R1 1079 aa12.23□□□□□ -0.45
HDAC3-203ENST00000467533 ZBED9Q6R2W3 1325 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 TMEM232C9JQI7 657 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 CKBP12277 381 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 RASA1P20936 1047 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 ALDH5A1P51649 535 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 HTRA4P83105 476 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 DLX2Q07687 328 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 CTR9Q6PD62 1173 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 RPAP2Q8IXW5 612 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 TMEM192Q8IY95 271 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 YME1L1Q96TA2 773 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 FSD1Q9BTV5 496 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 ARPP21Q9UBL0 812 aaPredicted RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 ADD3Q9UEY8 706 aaKnown RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 CD207Q9UJ71 328 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 TRPC6Q9Y210 931 aa12.22□□□□□ -0.45
HDAC3-203ENST00000467533 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
HDAC3-203ENST00000467533 A6NJR5 290 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 PROB1E7EW31 1015 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 RBAK-RBAKDNI3L0D1 243 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 NKRFO15226 690 aaKnown RBP eCLIP12.21□□□□□ -0.45
HDAC3-203ENST00000467533 TBX10O75333 385 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 CSPG5O95196 566 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 AVPR2P30518 371 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 ATP8B2P98198 1209 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 RBL2Q08999 1139 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 SIGLEC14Q08ET2 396 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 HYAL1Q12794 435 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
HDAC3-203ENST00000467533 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 FAM160B2Q86V87 743 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 COPS5Q92905 334 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 CHMP4CQ96CF2 233 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 CTAGE1Q96RT6 745 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 C1orf115Q9H7X2 142 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 TNNQ9UQP3 1299 aa12.21□□□□□ -0.45
HDAC3-203ENST00000467533 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
HDAC3-203ENST00000467533 ANP32CO43423 234 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 LGR5O75473 907 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 CTNNB1P35222 781 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 ADD2P35612 726 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 SNAP25P60880 206 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 CHURC1Q8WUH1 139 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 CEP95Q96GE4 821 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 IGFLR1Q9H665 355 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 CCPG1Q9ULG6 757 aa12.2□□□□□ -0.46
HDAC3-203ENST00000467533 IGKV6D-41A0A0C4DH26 115 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 TTLL1O95922 423 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 TRIM27P14373 513 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 NDUFV1P49821 464 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
HDAC3-203ENST00000467533 PDE4BQ07343 736 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 PDE4DQ08499 809 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 SESTD1Q86VW0 696 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 SCFD2Q8WU76 684 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.469e-7■■■■□ 21.8
HDAC3-203ENST00000467533 SYNPO2Q9UMS6 1093 aa12.19□□□□□ -0.46
HDAC3-203ENST00000467533 CACNA1HO95180 2353 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 LOC102724159A0A0B4J2E5 919 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 PTPDC1A2A3K4 754 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 MINDY4BA8MYZ0 360 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 LOC730098B7Z3J9 87 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 IPO8O15397 1037 aaKnown RBP12.18□□□□□ -0.46
HDAC3-203ENST00000467533 LINC01565O15544 149 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 KRT37O76014 449 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 RGS20O76081 388 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 UPP2O95045 317 aa12.18□□□□□ -0.46
HDAC3-203ENST00000467533 TXNP10599 105 aaKnown RBP12.18□□□□□ -0.46
HDAC3-203ENST00000467533 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC3-203ENST00000467533 BAATQ14032 418 aaPredicted RBP12.18□□□□□ -0.46
HDAC3-203ENST00000467533 PWP2Q15269 919 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms