RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PIK3CDO00329 1044 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 IKBKBO14920 756 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 RAD21O60216 631 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 CYP3A7P24462 503 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 SEMA3FQ13275 785 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 DPCR1Q3MIW9 517 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 KIAA1755Q5JYT7 1200 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 DHX40Q8IX18 779 aaKnown RBP10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 CRYGNQ8WXF5 182 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 ERCC4Q92889 916 aaPredicted RBP10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 WNT2BQ93097 391 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 DHX58Q96C10 678 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 PAGE5Q96GU1 130 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 MBOAT7Q96N66 472 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 SYT17Q9BSW7 474 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 WDR18Q9BV38 432 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 ZNF341Q9BYN7 854 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 BAZ2BQ9UIF8 2168 aaKnown RBP10.79□□□□□ -0.68
APOBEC1-202ENST00000467171 SMTNL1A8MU46 457 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 DPYSL4O14531 572 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 MEIS2O14770 477 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 WDR46O15213 610 aaKnown RBP10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 FOXN1O15353 648 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 AP5Z1O43299 807 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 SLC26A4O43511 780 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 MYL1P05976 194 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 UBA7P41226 1012 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 MORC3Q14149 939 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 PDIA5Q14554 519 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 PDXDC2PQ6P474 469 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 PDILTQ8N807 584 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 IGSF22Q8N9C0 903 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 MLKLQ8NB16 471 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 TRPM4Q8TD43 1214 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 SMARCE1Q969G3 411 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 GSDMAQ96QA5 445 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 EPAS1Q99814 870 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 CCDC39Q9UFE4 941 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 MAN1B1Q9UKM7 699 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 PNMA2Q9UL42 364 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 ARFGEF1Q9Y6D6 1849 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 ASTN2O75129 1339 aaPredicted RBP10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 MYH6P13533 1939 aa10.78□□□□□ -0.68
APOBEC1-202ENST00000467171 CIITAP33076 1130 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 USP14P54578 494 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 TPM4P67936 248 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 DPYDQ12882 1025 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 NCAPHQ15003 741 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 CALCRLQ16602 461 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 UBE2SQ16763 222 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 NOL9Q5SY16 702 aaKnown RBP10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 NBPF12Q5TAG4 269 aaPredicted RBP10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 ANGEL2Q5VTE6 544 aaKnown RBP10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 SCYL3Q8IZE3 742 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 SPICE1Q8N0Z3 855 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 ANO3Q9BYT9 981 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 RAB34Q9BZG1 259 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 DISC1Q9NRI5 854 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 DDX25Q9UHL0 483 aaKnown RBP10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 MRPL11Q9Y3B7 192 aaKnown RBP10.77□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L15C9J2P7 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L13C9JLJ4 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L11C9JVI0 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L18D6R9N7 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L22D6RA61 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L17D6RBQ6 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L19D6RCP7 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L20D6RJB6 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 BIN1O00499 593 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 OPLAHO14841 1288 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 TBX3O15119 743 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 TDP2O95551 362 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 TPM3P06753 285 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 CYP3A4P08684 503 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 FDX1P10109 184 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 BMP6P22004 513 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 ERCC5P28715 1186 aaPredicted RBP10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 CDC25BP30305 580 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 SREBF1P36956 1147 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 EPS15P42566 896 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 ZNF75DP51815 510 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 HIRAP54198 1017 aaPredicted RBP10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 GHRHRQ02643 423 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L24Q0WX57 530 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 TMEM266Q2M3C6 531 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 SUPT20HL1Q3ZLR7 823 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 NAALADL2Q58DX5 795 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 RRAGBQ5VZM2 374 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 USP17L6PQ6QN14 398 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 MRFAP1L1Q96HT8 127 aa10.76□□□□□ -0.69
APOBEC1-202ENST00000467171 FEZ1Q99689 392 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms