RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 OGDHLQ9ULD0 1010 aa13.86□□□□□ -0.19
SHROOM3-202ENST00000466541 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 ADCY6O43306 1168 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 SCG2P13521 617 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 RGS19P49795 217 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 TNFAIP2Q03169 654 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 SSRP1Q08945 709 aaKnown RBP13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 TMEM63BQ5T3F8 832 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 PXMP2Q9NR77 195 aa13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 MKI67P46013 3256 aaKnown RBP13.85□□□□□ -0.19
SHROOM3-202ENST00000466541 DNAH12Q6ZR08 3092 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 KBTBD13C9JR72 458 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 STXBP3O00186 592 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 PRPF3O43395 683 aaKnown RBP13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 PFKFB2O60825 505 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 LARGE1O95461 756 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 NR3C2P08235 984 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 C6orf222P0C671 652 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 ADCY7P51828 1080 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 SCRN1Q12765 414 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 STXBP2Q15833 593 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 NTRK3Q16288 839 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 PFKFB3Q16875 520 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 TYW1BQ6NUM6 668 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 CPLX2Q6PUV4 134 aaKnown RBP13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 NECAB2Q7Z6G3 386 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 TRIM22Q8IYM9 498 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 ARRDC4Q8NCT1 418 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 IL31RAQ8NI17 732 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 DPF3Q92784 378 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 FERMT2Q96AC1 680 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 KIF2CQ99661 725 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 WDR11Q9BZH6 1224 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 KATNBL1Q9H079 304 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 ALDH8A1Q9H2A2 487 aaPredicted RBP13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 VTA1Q9NP79 307 aa13.84□□□□□ -0.19
SHROOM3-202ENST00000466541 NID2Q14112 1375 aa13.83□□□□□ -0.19
SHROOM3-202ENST00000466541 MEIS2O14770 477 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 DYNC1LI2O43237 492 aaPredicted RBP13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 SORBS3O60504 671 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 IFNAR1P17181 557 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 SMPD1P17405 629 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 RBM25P49756 843 aaKnown RBP13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 LRRC41Q15345 812 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 ME3Q16798 604 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 MORC4Q8TE76 937 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 IL17RAQ96F46 866 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 PGBD1Q96JS3 809 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 IWS1Q96ST2 819 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 PDCD2LQ9BRP1 358 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 BACH2Q9BYV9 841 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 SENP6Q9GZR1 1112 aaPredicted RBP13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 C11orf49Q9H6J7 331 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 BARHL2Q9NY43 387 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 RTEL1Q9NZ71 1219 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
SHROOM3-202ENST00000466541 MYH7BA7E2Y1 1941 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 DUSP11O75319 330 aaKnown RBP13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 EDNRBP24530 442 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 CCND2P30279 289 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 FOSBP53539 338 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 BEX3Q00994 111 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 PGM5Q15124 567 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 PKN1Q16512 942 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 IQSEC1Q6DN90 963 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 RNF180Q86T96 592 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 TLK2Q86UE8 772 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 VTI1AQ96AJ9 217 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 AP5M1Q9H0R1 490 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 SPC25Q9HBM1 224 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 TMEM260Q9NX78 707 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 VPS54Q9P1Q0 977 aa13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 RBM27Q9P2N5 1060 aaKnown RBP13.82□□□□□ -0.2
SHROOM3-202ENST00000466541 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 MYADML2A6NDP7 307 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 EIF3JO75822 258 aaKnown RBP13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 CDKL5O76039 1030 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 LY6KQ17RY6 165 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 GNASQ5JWF2 1037 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 JAKMIP3Q5VZ66 844 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 SCFD2Q8WU76 684 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 COPS5Q92905 334 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 AIFM3Q96NN9 605 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 MAF1Q9H063 256 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 RIC8AQ9NPQ8 531 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
SHROOM3-202ENST00000466541 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms