RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 GOLGA6DP0CG33 693 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 KCNA3P22001 575 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 UBA7P41226 1012 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 EPHB4P54760 987 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 APBA1Q02410 837 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 SPA17Q15506 151 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 FKBP15Q5T1M5 1219 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 EMC10Q5UCC4 262 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 ICE2Q659A1 982 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 C1orf131Q8NDD1 294 aaKnown RBP16.73■□□□□ 0.27
GAPDH-206ENST00000466525 SH2D4AQ9H788 454 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 GOLGA6AQ9NYA3 693 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 TSKSQ9UJT2 592 aa16.73■□□□□ 0.27
GAPDH-206ENST00000466525 RCCD1A6NED2 376 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 B4DLN1 442 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 SNAP23O00161 211 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 MIIPQ5JXC2 388 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 TADA2BQ86TJ2 420 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 SPATS2Q86XZ4 545 aaKnown RBP16.72■□□□□ 0.27
GAPDH-206ENST00000466525 CNOT6LQ96LI5 555 aaKnown RBP16.72■□□□□ 0.27
GAPDH-206ENST00000466525 RRAGCQ9HB90 399 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 AGPAT5Q9NUQ2 364 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 ARFGEF1Q9Y6D6 1849 aa16.72■□□□□ 0.27
GAPDH-206ENST00000466525 FLT1P17948 1338 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 CCDC194A0A1B0GVG4 234 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 VGLL3A8MV65 326 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 ZEB2O60315 1214 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 SRGAP2O75044 1071 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 COBLO75128 1261 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 IRAK1P51617 712 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 AMPD3Q01432 767 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 GRM4Q14833 912 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 CCDC42Q96M95 316 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
GAPDH-206ENST00000466525 HYOU1Q9Y4L1 999 aa16.71■□□□□ 0.27
GAPDH-206ENST00000466525 USP17L12C9JPN9 530 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 USP17L21D6R901 530 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 RGL2O15211 777 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 RCSD1Q6JBY9 416 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 CCDC84Q86UT8 332 aaPredicted RBP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 RNF10Q8N5U6 811 aaKnown RBP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 LZTS2Q9BRK4 669 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 TRIM9Q9C026 710 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 ABCF2Q9UG63 623 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 ROBO3Q96MS0 1386 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 FAM205AQ6ZU69 1335 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 ATAD5Q96QE3 1844 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 SRRM3A6NNA2 597 aaPredicted RBP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 EIF3HO15372 352 aaKnown RBP eCLIP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 CAMTA2O94983 1202 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 MYBL2P10244 700 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 PACS2Q86VP3 889 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 SPATA4Q8NEY3 305 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 CAPZA3Q96KX2 299 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 DCP1AQ9NPI6 582 aaPredicted RBP16.7■□□□□ 0.26
GAPDH-206ENST00000466525 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 TCP11L1Q9NUJ3 509 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 MAPK8IP1Q9UQF2 711 aa16.7■□□□□ 0.26
GAPDH-206ENST00000466525 EBAG9O00559 213 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 VEGFAP15692 232 aaPredicted RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 DYNLL1P63167 89 aaKnown RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 SF3B3Q15393 1217 aaKnown RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 ZNF384Q8TF68 577 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 NSUN4Q96CB9 384 aaKnown RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 CAPS2Q9BXY5 557 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 SIK3Q9Y2K2 1263 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 BRCA1P38398 1863 aaKnown RBP16.69■□□□□ 0.26
GAPDH-206ENST00000466525 MYH10P35580 1976 aa16.69■□□□□ 0.26
GAPDH-206ENST00000466525 SSU72P8A0A1W2PR75 194 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 ZNF263O14978 683 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 CAPN15O75808 1086 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 MTIF2P46199 727 aaKnown RBP16.68■□□□□ 0.26
GAPDH-206ENST00000466525 ANKRD40Q6AI12 368 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 INTS5Q6P9B9 1019 aaKnown RBP16.68■□□□□ 0.26
GAPDH-206ENST00000466525 FBXO33Q7Z6M2 555 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 CD302Q8IX05 232 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 MREGQ8N565 214 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.68■□□□□ 0.264e-10■■■□□ 19.2
GAPDH-206ENST00000466525 OSBPL9Q96SU4 736 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 NUCKS1Q9H1E3 243 aaKnown RBP16.68■□□□□ 0.26
GAPDH-206ENST00000466525 KAT14Q9H8E8 782 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 STIM2Q9P246 746 aa16.68■□□□□ 0.26
GAPDH-206ENST00000466525 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
GAPDH-206ENST00000466525 TNRC6CQ9HCJ0 1690 aaKnown RBP16.68■□□□□ 0.26
GAPDH-206ENST00000466525 CYP2D7A0A087X1C5 515 aa16.67■□□□□ 0.26
GAPDH-206ENST00000466525 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms