RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 WDR93Q6P2C0 686 aa21.58■■□□□ 1.04
LIMS2-212ENST00000466410 LRRC47Q8N1G4 583 aaKnown RBP21.58■■□□□ 1.04
LIMS2-212ENST00000466410 FAM163AQ96GL9 167 aaPredicted RBP21.58■■□□□ 1.04
LIMS2-212ENST00000466410 GBP3Q9H0R5 595 aa21.58■■□□□ 1.04
LIMS2-212ENST00000466410 LY75O60449 1722 aa21.58■■□□□ 1.04
LIMS2-212ENST00000466410 POTEMA6NI47 508 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 ZNF263O14978 683 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 ATP2B4P23634 1241 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 ORC2Q13416 577 aaPredicted RBP21.57■■□□□ 1.04
LIMS2-212ENST00000466410 MEX3CQ5U5Q3 659 aaKnown RBP21.57■■□□□ 1.04
LIMS2-212ENST00000466410 KRT26Q7Z3Y9 468 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 EHBP1Q8NDI1 1231 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 NUDT12Q9BQG2 462 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 CALCOCO1Q9P1Z2 691 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 A0A1W2PQJ5 194 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 MACROD2A1Z1Q3 448 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 EPHB6O15197 1021 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 TUBBP07437 444 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 USP14P54578 494 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 EIF6P56537 245 aaKnown RBP21.57■■□□□ 1.04
LIMS2-212ENST00000466410 GPS2Q13227 327 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 CLEC10AQ8IUN9 316 aa21.57■■□□□ 1.04
LIMS2-212ENST00000466410 MSL3Q8N5Y2 521 aaKnown RBP21.57■■□□□ 1.04
LIMS2-212ENST00000466410 LARP4BQ92615 738 aaKnown RBP21.57■■□□□ 1.04
LIMS2-212ENST00000466410 GAKO14976 1311 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 AFF2P51816 1311 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 FXR2P51116 673 aaKnown RBP eCLIP21.56■■□□□ 1.04
LIMS2-212ENST00000466410 UNC13DQ70J99 1090 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 TXLNBQ8N3L3 684 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 MTMR4Q9NYA4 1195 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 STK17AQ9UEE5 414 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 EIF3JO75822 258 aaKnown RBP21.56■■□□□ 1.04
LIMS2-212ENST00000466410 ADCY7P51828 1080 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 CDK17Q00537 523 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 CDK5RAP3Q96JB5 506 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
LIMS2-212ENST00000466410 VPS18Q9P253 973 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 POLLQ9UGP5 575 aa21.56■■□□□ 1.04
LIMS2-212ENST00000466410 LRRIQ3A6PVS8 624 aaPredicted RBP21.55■■□□□ 1.04
LIMS2-212ENST00000466410 ZNF185O15231 689 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 HSPA1LP34931 641 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 CRY2Q49AN0 593 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 VWA3BQ502W6 1294 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 EXOC4Q96A65 974 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 NDST4Q9H3R1 872 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 GPCPD1Q9NPB8 672 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 FAM207AQ9NSI2 230 aaPredicted RBP21.55■■□□□ 1.04
LIMS2-212ENST00000466410 SIK3Q9Y2K2 1263 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 PICALMQ13492 652 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 KCNK18Q7Z418 384 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 CCDC42Q96M95 316 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 PLAGL2Q9UPG8 496 aa21.55■■□□□ 1.04
LIMS2-212ENST00000466410 PVALEFA0A1B0GWK0 134 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 IDEP14735 1019 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 VAV2P52735 878 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 KIF5AQ12840 1032 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 TMEM266Q2M3C6 531 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 GLIS3Q8NEA6 775 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 ARHGAP20Q9P2F6 1191 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 DAGLAQ9Y4D2 1042 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 PDE2AO00408 941 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-212ENST00000466410 AKR1B1P15121 316 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 ERCC3P19447 782 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 LMAN1P49257 510 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 C2CD5Q86YS7 1000 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 SLF2Q8IX21 1173 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 CERKQ8TCT0 537 aa21.54■■□□□ 1.04
LIMS2-212ENST00000466410 SMCR8Q8TEV9 937 aaPredicted RBP21.54■■□□□ 1.04
LIMS2-212ENST00000466410 hCG_1984214I3L0E3 225 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 GPIHBP1Q8IV16 184 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 GUF1Q8N442 669 aaKnown RBP21.53■■□□□ 1.04
LIMS2-212ENST00000466410 ZNF713Q8N859 430 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-212ENST00000466410 TBC1D16Q8TBP0 767 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 SNX29Q8TEQ0 813 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 RAD54LQ92698 747 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 FAN1Q9Y2M0 1017 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 HNRNPH3P31942 346 aaKnown RBP21.53■■□□□ 1.04
LIMS2-212ENST00000466410 TNNI2P48788 182 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 SPA17Q15506 151 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 ASPRV1Q53RT3 343 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 DPP8Q6V1X1 898 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-212ENST00000466410 MMRN2Q9H8L6 949 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 LRRC4BQ9NT99 713 aa21.53■■□□□ 1.04
LIMS2-212ENST00000466410 GABPAQ06546 454 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 LRRC41Q15345 812 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 UBE2SQ16763 222 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 CCDC96Q2M329 555 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 DDX12PQ92771 950 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 SECISBP2LQ93073 1101 aaKnown RBP21.52■■□□□ 1.04
LIMS2-212ENST00000466410 JADE2Q9NQC1 790 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.52■■□□□ 1.04
LIMS2-212ENST00000466410 ANO9A1A5B4 782 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 SNHG28P0DPA3 235 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 CKAP4Q07065 602 aaKnown RBP21.52■■□□□ 1.04
LIMS2-212ENST00000466410 PDIA5Q14554 519 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 ECM1Q16610 540 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 MAN2A1Q16706 1144 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 SEPT12Q8IYM1 358 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 TBC1D22AQ8WUA7 517 aa21.52■■□□□ 1.04
LIMS2-212ENST00000466410 GJA10Q969M2 543 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms