RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 CRACR2BQ8N4Y2 399 aaPredicted RBP3.97□□□□□ -1.77
CCDC93-205ENST00000466171 ADAMTS17Q8TE56 1095 aa3.97□□□□□ -1.77
CCDC93-205ENST00000466171 SAMD11Q96NU1 681 aa3.97□□□□□ -1.77
CCDC93-205ENST00000466171 NOX5Q96PH1 765 aa3.97□□□□□ -1.77
CCDC93-205ENST00000466171 SPATA6Q9NWH7 488 aaPredicted RBP3.97□□□□□ -1.77
CCDC93-205ENST00000466171 GULP1Q9UBP9 304 aa3.97□□□□□ -1.77
CCDC93-205ENST00000466171 SRRDQ9UH36 339 aa3.97□□□□□ -1.77
CCDC93-205ENST00000466171 ZNF536O15090 1300 aa3.96□□□□□ -1.77
CCDC93-205ENST00000466171 AKAP8O43823 692 aaKnown RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 FUCA1P04066 466 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 RPL13P26373 211 aaKnown RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 EIF6P56537 245 aaKnown RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 SMAD4Q13485 552 aaKnown RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 RGL3Q3MIN7 710 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 FAM26FQ5R3K3 315 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 ETV3LQ6ZN32 361 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 LINC00482Q8N8I6 264 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 KYQ8NBH2 561 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 OR6P1Q8NGX9 317 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 RCC1LQ96I51 464 aaKnown RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 FGD4Q96M96 766 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 MTA3Q9BTC8 594 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 KLHL25Q9H0H3 589 aa3.96□□□□□ -1.78
CCDC93-205ENST00000466171 NGRNQ9NPE2 291 aaKnown RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 CGGBP1Q9UFW8 167 aaPredicted RBP3.96□□□□□ -1.78
CCDC93-205ENST00000466171 LTBP3Q9NS15 1303 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 MROH6A6NGR9 719 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 C1QTNF3-AMACRE9PGA6 284 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 NTRK1P04629 796 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 NAT2P11245 290 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 TNFRSF1AP19438 455 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 SURF1Q15526 300 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 ZNF394Q53GI3 561 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 POMZP3Q6PJE2 187 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 GLB1LQ6UWU2 654 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 PLEKHH3Q7Z736 793 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 ARHGEF39Q8N4T4 335 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 TTLL6Q8N841 843 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 C19orf47Q8N9M1 422 aaKnown RBP3.95□□□□□ -1.78
CCDC93-205ENST00000466171 RBM15Q96T37 977 aaKnown RBP eCLIP3.95□□□□□ -1.78
CCDC93-205ENST00000466171 MCMBPQ9BTE3 642 aa3.95□□□□□ -1.78
CCDC93-205ENST00000466171 C11orf84Q9BUA3 381 aaPredicted RBP3.95□□□□□ -1.78
CCDC93-205ENST00000466171 C7orf72A4D263 438 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 MATN3O15232 486 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 EPHX1P07099 455 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 THBS2P35442 1172 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 FANCCQ00597 558 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 TBC1D10BQ4KMP7 808 aaPredicted RBP3.94□□□□□ -1.78
CCDC93-205ENST00000466171 CD300LDQ6UXZ3 194 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 CCDC81Q6ZN84 652 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 SEC14L1Q92503 715 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 DVL3Q92997 716 aaPredicted RBP3.94□□□□□ -1.78
CCDC93-205ENST00000466171 C8orf49Q96NF6 230 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 GORASP1Q9BQQ3 440 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 YIPF4Q9BSR8 244 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 C1QTNF3Q9BXJ4 246 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 MARCH2Q9P0N8 246 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 AKT3Q9Y243 479 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 PCDHGB7Q9Y5F8 929 aa3.94□□□□□ -1.78
CCDC93-205ENST00000466171 NOP56O00567 594 aaKnown RBP3.93□□□□□ -1.78
CCDC93-205ENST00000466171 PPP1R11O60927 126 aaPredicted RBP3.93□□□□□ -1.78
CCDC93-205ENST00000466171 C8BP07358 591 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 ZNF20P17024 532 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 PPP2R5EQ16537 467 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 MCTP2Q6DN12 878 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 ZNF654Q8IZM8 581 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 KISS1RQ969F8 398 aaPredicted RBP3.93□□□□□ -1.78
CCDC93-205ENST00000466171 LCORQ96JN0 433 aaPredicted RBP3.93□□□□□ -1.78
CCDC93-205ENST00000466171 MMP19Q99542 508 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 APBA2Q99767 749 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 BACH2Q9BYV9 841 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 CLEC1BQ9P126 229 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 FBLN5Q9UBX5 448 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 PCDHB10Q9UN67 800 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 INVSQ9Y283 1065 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 SIT1Q9Y3P8 196 aa3.93□□□□□ -1.78
CCDC93-205ENST00000466171 A0A1W2PQH9 124 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 ANKRD34BA5PLL1 514 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 C9orf118A6NHY6 69 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 CYP7B1O75881 506 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 KCNH1O95259 989 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 FSHBP01225 129 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 GDF5P43026 501 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 GIPRP48546 466 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 IQCEQ6IPM2 695 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 USP51Q70EK9 711 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 MIB1Q86YT6 1006 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 TXNDC5Q8NBS9 432 aaKnown RBP3.92□□□□□ -1.78
CCDC93-205ENST00000466171 PLEKHO2Q8TD55 490 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 CPLX3Q8WVH0 158 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 CDK5RAP1Q96SZ6 601 aaKnown RBP3.92□□□□□ -1.78
CCDC93-205ENST00000466171 GINM1Q9NU53 330 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 BTG4Q9NY30 223 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 EFR3BQ9Y2G0 817 aa3.92□□□□□ -1.78
CCDC93-205ENST00000466171 C22orf46C9J442 243 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 DDX3XO00571 662 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC93-205ENST00000466171 SGSM2O43147 1006 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 LAMTOR5O43504 91 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 MYO1BO43795 1136 aa3.91□□□□□ -1.78
CCDC93-205ENST00000466171 CYP1A1P04798 512 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms