RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PSMC4P43686 418 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 NUCB2P80303 420 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 KCTD2Q14681 263 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 ZNF792Q3KQV3 632 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 MCTP1Q6DN14 999 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 PIK3AP1Q6ZUJ8 805 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 FCHSD1Q86WN1 690 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 PXMP2Q9NR77 195 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 CHMP5Q9NZZ3 219 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 GJD2Q9UKL4 321 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 IVNS1ABPQ9Y6Y0 642 aa12.74□□□□□ -0.37
VCP-204ENST00000466100 CCDC194A0A1B0GVG4 234 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 SPDYE3A6NKU9 549 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 POTEB2H3BUK9 544 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 WNT7AO00755 349 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 TNPO2O14787 897 aaKnown RBP12.73□□□□□ -0.37
VCP-204ENST00000466100 IGHA2P01877 340 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 HOXC6P09630 235 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 EDNRBP24530 442 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 TOB1P50616 345 aaPredicted RBP12.73□□□□□ -0.37
VCP-204ENST00000466100 FCGRTP55899 365 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 NONOQ15233 471 aaKnown RBP eCLIP12.73□□□□□ -0.37
VCP-204ENST00000466100 CCAR1Q8IX12 1150 aaKnown RBP12.73□□□□□ -0.37
VCP-204ENST00000466100 DNERQ8NFT8 737 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 IL31RAQ8NI17 732 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 ZNF296Q8WUU4 475 aaPredicted RBP12.73□□□□□ -0.37
VCP-204ENST00000466100 RMDN3Q96TC7 470 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 ZSCAN16Q9H4T2 348 aaPredicted RBP12.73□□□□□ -0.37
VCP-204ENST00000466100 DOCK5Q9H7D0 1870 aa12.73□□□□□ -0.37
VCP-204ENST00000466100 FKTNO75072 461 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 CYP3A4P08684 503 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 ALDH5A1P51649 535 aaPredicted RBP12.72□□□□□ -0.37
VCP-204ENST00000466100 ARHGAP4P98171 946 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 MAP2K5Q13163 448 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 INF2Q27J81 1249 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
VCP-204ENST00000466100 MYSM1Q5VVJ2 828 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 FAM173BQ6P4H8 233 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
VCP-204ENST00000466100 CD99L2Q8TCZ2 262 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 MORC4Q8TE76 937 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 NSUN6Q8TEA1 469 aaKnown RBP12.72□□□□□ -0.37
VCP-204ENST00000466100 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 SOCS4Q8WXH5 440 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
VCP-204ENST00000466100 PDCD2LQ9BRP1 358 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 BEGAINQ9BUH8 593 aa12.72□□□□□ -0.37
VCP-204ENST00000466100 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
VCP-204ENST00000466100 WDR81Q562E7 1941 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 LOC102724159A0A0B4J2E5 919 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 EIF2AK2P19525 551 aaKnown RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 TRAPPC10P48553 1259 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 MRPS9P82933 396 aaKnown RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 PGM5Q15124 567 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 PWP2Q15269 919 aaKnown RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 NEK8Q86SG6 692 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 ERO1AQ96HE7 468 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 MBOAT7Q96N66 472 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 EHMT1Q9H9B1 1298 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
VCP-204ENST00000466100 DDX49Q9Y6V7 483 aaKnown RBP12.71□□□□□ -0.37
VCP-204ENST00000466100 CYP3A7-CYP3A51PA0A087WV96 503 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 FOXN1O15353 648 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
VCP-204ENST00000466100 CYP3A7P24462 503 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 CIITAP33076 1130 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 UBXN2AP68543 259 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 PRKCZQ05513 592 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 NBR1Q14596 966 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 KIF22Q14807 665 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 ARHGEF16Q5VV41 709 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 MOXD1Q6UVY6 613 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 MAMDC4Q6UXC1 1216 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 VSIG10LQ86VR7 867 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 MAML3Q96JK9 1138 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 IWS1Q96ST2 819 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 APBA2Q99767 749 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 SRRDQ9UH36 339 aa12.7□□□□□ -0.38
VCP-204ENST00000466100 DNAH12Q6ZR08 3092 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 IGLV3-22A0A075B6J6 115 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 TDP2O95551 362 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 GNRH1P01148 92 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 NR3C2P08235 984 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
VCP-204ENST00000466100 RGS2P41220 211 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 FLT3LGP49771 235 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 USP11P51784 963 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 IRF5Q13568 498 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 PPP4R3AQ6IN85 833 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 XRRA1Q6P2D8 792 aa12.69□□□□□ -0.38
VCP-204ENST00000466100 DPP9Q86TI2 863 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms