RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	PPP1R12B	O60237	982 aa	Predicted RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	TRAK2	O60296	914 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	PTMS	P20962	102 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	USP14	P54578	494 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	NLRP5	P59047	1200 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	MOGS	Q13724	837 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	SLC39A14	Q15043	492 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	SAFB	Q15424	915 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	ZYX	Q15942	572 aa	Known RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	KLHL40	Q2TBA0	621 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	ANO1	Q5XXA6	986 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	FAM160B2	Q86V87	743 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	CHURC1	Q8WUH1	139 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	CLMN	Q96JQ2	1002 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	ZNF396	Q96N95	335 aa	Predicted RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	P2RX7	Q99572	595 aa	Known RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	AS3MT	Q9HBK9	375 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	RIC8A	Q9NPQ8	531 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	PICK1	Q9NRD5	415 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	SEC63	Q9UGP8	760 aa	Known RBP	10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	CFAP45	Q9UL16	551 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	KCNH4	Q9UQ05	1017 aa		10.1	□□□□□ -0.79
UBA3-208	ENST00000465627	SMCO2	A6NFE2	343 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	GOLGA6L22	H0YM25	854 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	IREB2	P48200	963 aa	Known RBP	10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	TRAPPC10	P48553	1259 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	NAPA	P54920	295 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	UBE2H	P62256	183 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	GHRHR	Q02643	423 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	NBR1	Q14596	966 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	LRIT3	Q3SXY7	679 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	RILPL1	Q5EBL4	403 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	UBE2Q1	Q7Z7E8	422 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	TEX2	Q8IWB9	1127 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	ANKRD13A	Q8IZ07	590 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	REPS2	Q8NFH8	660 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	MAFA	Q8NHW3	353 aa	Predicted RBP	10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	RASGRP4	Q8TDF6	673 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	CRYGN	Q8WXF5	182 aa		10.09	□□□□□ -0.79
UBA3-208	ENST00000465627	MYH7B	A7E2Y1	1941 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	ZSWIM8	A7E2V4	1837 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627		A0A0G2JLL6	359 aa	Predicted RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	MEIS2	O14770	477 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	GJA5	P36382	358 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	SNAP25	P60880	206 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PPAT	Q06203	517 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PRKG1	Q13976	671 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	SF3A1	Q15459	793 aa	Known RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	SLC9C1	Q4G0N8	1177 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PRRT2	Q7Z6L0	340 aa	Predicted RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	ERO1B	Q86YB8	467 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	C4orf32	Q8N8J7	132 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PRPF38A	Q8NAV1	312 aa	Known RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	KCTD12	Q96CX2	325 aa	Known RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	SPATA32	Q96LK8	384 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	FEZ1	Q99689	392 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	GDF15	Q99988	308 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	AMN	Q9BXJ7	453 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	EFCC1	Q9HA90	598 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	SLC38A10	Q9HBR0	1119 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	C6orf50	Q9HD87	102 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	RTN4	Q9NQC3	1192 aa	Known RBP	10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PPP1R9A	Q9ULJ8	1098 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PCDHB6	Q9Y5E3	794 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	PTCH2	Q9Y6C5	1203 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	BAHCC1	Q9P281	2608 aa		10.08	□□□□□ -0.8
UBA3-208	ENST00000465627	FAM237A	A0A1B0GTK4	181 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	TRIM75P	A6NK02	468 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	PIK3CD	O00329	1044 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	CXCL11	O14625	94 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	IRF6	O14896	467 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	PPP6R2	O75170	966 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	TAL1	P17542	331 aa	Predicted RBP	10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	NCL	P19338	710 aa	Known RBP	10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	GNA11	P29992	359 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	NF2	P35240	595 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	HMGCS2	P54868	508 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	FKBP1B	P68106	108 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	PPIL2	Q13356	520 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	CSPP1	Q1MSJ5	1256 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	CATSPERG	Q6ZRH7	1159 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	FBXO11	Q86XK2	927 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	SH3TC2	Q8TF17	1288 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	SLF1	Q9BQI6	1058 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	HTATIP2	Q9BUP3	242 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	CRISPLD2	Q9H0B8	497 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	BRMS1	Q9HCU9	246 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	PCDHA7	Q9UN72	937 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	PCDHA1	Q9Y5I3	950 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	CSAD	Q9Y600	493 aa		10.07	□□□□□ -0.8
UBA3-208	ENST00000465627	MYPN	Q86TC9	1320 aa		10.06	□□□□□ -0.8
UBA3-208	ENST00000465627	CDH23	Q9H251	3354 aa		10.06	□□□□□ -0.8
UBA3-208	ENST00000465627		A0A1W2PQ27	194 aa		10.06	□□□□□ -0.8
UBA3-208	ENST00000465627		A0A1W2PQ64	194 aa		10.06	□□□□□ -0.8
UBA3-208	ENST00000465627		A0A1W2PQD8	194 aa		10.06	□□□□□ -0.8

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