RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DCDC2CA8MYV0 355 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 DDAH1O94760 285 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 EIF2AK2P19525 551 aaKnown RBP25.28■■□□□ 1.64
LIME1-203ENST00000465591 RXRAP19793 462 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 RAB11FIP4Q86YS3 637 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 RASEFQ8IZ41 740 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 NSUN6Q8TEA1 469 aaKnown RBP25.28■■□□□ 1.64
LIME1-203ENST00000465591 PIBF1Q8WXW3 757 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 TMEM87BQ96K49 555 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 MPHOSPH6Q99547 160 aaKnown RBP25.28■■□□□ 1.64
LIME1-203ENST00000465591 TBX21Q9UL17 535 aa25.28■■□□□ 1.64
LIME1-203ENST00000465591 PNMA6FA0A0J9YX94 578 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 HOXA13P31271 388 aaPredicted RBP25.27■■□□□ 1.64
LIME1-203ENST00000465591 PSMC6P62333 389 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 PPP2R5BQ15173 497 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 C9orf50Q5SZB4 431 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 FAM126BQ8IXS8 530 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 SLC43A3Q8NBI5 491 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 OR6J1Q8NGC5 347 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 SCFD2Q8WU76 684 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 MAP3K14Q99558 947 aa25.27■■□□□ 1.64
LIME1-203ENST00000465591 PLEKHA8P1O95397 391 aa25.26■■□□□ 1.63
LIME1-203ENST00000465591 EPHB4P54760 987 aa25.26■■□□□ 1.63
LIME1-203ENST00000465591 CCDC62Q6P9F0 684 aa25.26■■□□□ 1.63
LIME1-203ENST00000465591 PXMP2Q9NR77 195 aa25.26■■□□□ 1.63
LIME1-203ENST00000465591 SCN10AQ9Y5Y9 1956 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 B4DLN1 442 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 CABYRO75952 493 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 TXNP10599 105 aaKnown RBP25.25■■□□□ 1.63
LIME1-203ENST00000465591 RAG1P15918 1043 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 LIFRP42702 1097 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 MRPL12P52815 198 aaKnown RBP25.25■■□□□ 1.63
LIME1-203ENST00000465591 ITGA7Q13683 1181 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 SHHQ15465 462 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 ADCK5Q3MIX3 580 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 ARHGEF16Q5VV41 709 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 NFXL1Q6ZNB6 911 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 SEPT14Q6ZU15 432 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 CMTR1Q8N1G2 835 aaKnown RBP25.25■■□□□ 1.63
LIME1-203ENST00000465591 CTCFLQ8NI51 663 aaPredicted RBP25.25■■□□□ 1.63
LIME1-203ENST00000465591 TCEANC2Q96MN5 208 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 IWS1Q96ST2 819 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 SPZ1Q9BXG8 430 aa25.25■■□□□ 1.63
LIME1-203ENST00000465591 MYH7BA7E2Y1 1941 aa25.24■■□□□ 1.63
LIME1-203ENST00000465591 MROH7Q68CQ1 1323 aa25.24■■□□□ 1.63
LIME1-203ENST00000465591 CCDC69A6NI79 296 aa25.24■■□□□ 1.63
LIME1-203ENST00000465591 ZEB2O60315 1214 aa25.24■■□□□ 1.63
LIME1-203ENST00000465591 CD4P01730 458 aa25.24■■□□□ 1.63
LIME1-203ENST00000465591 SRBD1Q8N5C6 995 aaKnown RBP25.24■■□□□ 1.63
LIME1-203ENST00000465591 NKRFO15226 690 aaKnown RBP eCLIP25.23■■□□□ 1.631e-7■■■□□ 16.1
LIME1-203ENST00000465591 NR3C2P08235 984 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 PURAQ00577 322 aaKnown RBP25.23■■□□□ 1.63
LIME1-203ENST00000465591 TTLL4Q14679 1199 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 STXBP2Q15833 593 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 RNF20Q5VTR2 975 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 TMTC2Q8N394 836 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 IL31RAQ8NI17 732 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 NEK1Q96PY6 1258 aa25.23■■□□□ 1.63
LIME1-203ENST00000465591 MYL3P08590 195 aa25.22■■□□□ 1.63
LIME1-203ENST00000465591 KIF5BP33176 963 aa25.22■■□□□ 1.63
LIME1-203ENST00000465591 EXOSC10Q01780 885 aaKnown RBP25.22■■□□□ 1.63
LIME1-203ENST00000465591 LY6KQ17RY6 165 aa25.22■■□□□ 1.63
LIME1-203ENST00000465591 TSGA10IPQ3SY00 556 aa25.22■■□□□ 1.63
LIME1-203ENST00000465591 PDCD2LQ9BRP1 358 aa25.22■■□□□ 1.63
LIME1-203ENST00000465591 LAMA2P24043 3122 aaKnown RBP25.22■■□□□ 1.63
LIME1-203ENST00000465591 A6NJR5 290 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 RGS20O76081 388 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 TIMP1P01033 207 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 CPT1AP50416 773 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 SGMS1Q86VZ5 419 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 PPP1R13LQ8WUF5 828 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 ZFP91Q96JP5 570 aaPredicted RBP25.21■■□□□ 1.63
LIME1-203ENST00000465591 POLR3EQ9NVU0 708 aa25.21■■□□□ 1.63
LIME1-203ENST00000465591 MAP3K20Q9NYL2 800 aaKnown RBP25.21■■□□□ 1.63
LIME1-203ENST00000465591 GCOM1H8Y6P7 765 aaPredicted RBP25.2■■□□□ 1.62
LIME1-203ENST00000465591 NEFLP07196 543 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 POLR2MP0CAP2 368 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 SMARCA1P28370 1054 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 ARHGAP1Q07960 439 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 PGM5Q15124 567 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 FCHSD1Q86WN1 690 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 SAMD3Q8N6K7 520 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 RRP36Q96EU6 259 aaKnown RBP25.2■■□□□ 1.62
LIME1-203ENST00000465591 PPP1R12CQ9BZL4 782 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 TRPV6Q9H1D0 765 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 SLC12A7Q9Y666 1083 aa25.2■■□□□ 1.62
LIME1-203ENST00000465591 hCG_1642624A0A1W2PR95 340 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 TLR3O15455 904 aaKnown RBP25.19■■□□□ 1.62
LIME1-203ENST00000465591 B4GALT4O60513 344 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 EIF3JO75822 258 aaKnown RBP25.19■■□□□ 1.62
LIME1-203ENST00000465591 MYCLP12524 364 aaPredicted RBP25.19■■□□□ 1.62
LIME1-203ENST00000465591 FPGSQ05932 587 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 TRAF1Q13077 416 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 MICU3Q86XE3 530 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 AFG1LQ8WV93 481 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 LZTS2Q9BRK4 669 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 DDX41Q9UJV9 622 aaKnown RBP25.19■■□□□ 1.62
LIME1-203ENST00000465591 BRPF3Q9ULD4 1205 aa25.19■■□□□ 1.62
LIME1-203ENST00000465591 UMODL1Q5DID0 1318 aa25.18■■□□□ 1.62
LIME1-203ENST00000465591 CALM1P0DP23 149 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms