RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 COPS5Q92905 334 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 SEC16BQ96JE7 1060 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 NOX5Q96PH1 765 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 SPATA25Q9BR10 227 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNX4-202ENST00000465505 APEX2Q9UBZ4 518 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 AKT3Q9Y243 479 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 SUGT1Q9Y2Z0 365 aa4.8□□□□□ -1.64
SNX4-202ENST00000465505 TRBV23OR9-2A0A075B6M9 112 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 ZBTB7AO95365 584 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 PLP2Q04941 152 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 NT5DC1Q5TFE4 455 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 VHLLQ6RSH7 139 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 DBX2Q6ZNG2 339 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 SMARCC2Q8TAQ2 1214 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 PLEKHO2Q8TD55 490 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 DPF3Q92784 378 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 GPRC5CQ9NQ84 441 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 SPATA6Q9NWH7 488 aaPredicted RBP4.79□□□□□ -1.64
SNX4-202ENST00000465505 NUDT5Q9UKK9 219 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 EMC9Q9Y3B6 208 aa4.79□□□□□ -1.64
SNX4-202ENST00000465505 NOBOXO60393 691 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 NPHS1O60500 1241 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 KCNH1O95259 989 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 NTRK1P04629 796 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 PLS3P13797 630 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 CACNB2Q08289 660 aaPredicted RBP4.78□□□□□ -1.64
SNX4-202ENST00000465505 EFEMP1Q12805 493 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 MBLAC2Q68D91 279 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 WWC2Q6AWC2 1192 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 GGNQ86UU5 652 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 FERMT3Q86UX7 667 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 CARFQ8N187 725 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 BVESQ8NE79 360 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 USP33Q8TEY7 942 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 CPLX3Q8WVH0 158 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 MMP19Q99542 508 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 APBA2Q99767 749 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 BDH2Q9BUT1 245 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 CLEC1BQ9P126 229 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 SIT1Q9Y3P8 196 aa4.78□□□□□ -1.64
SNX4-202ENST00000465505 CCDC9Q9Y3X0 531 aaKnown RBP4.78□□□□□ -1.64
SNX4-202ENST00000465505 FUCA1P04066 466 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 ADRB1P08588 477 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 CYP4F3Q08477 520 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 SCRN1Q12765 414 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 UBXN11Q5T124 520 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 LINC00482Q8N8I6 264 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 MRRFQ96E11 262 aaKnown RBP4.77□□□□□ -1.65
SNX4-202ENST00000465505 PKNOX2Q96KN3 472 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 KIAA1522Q9P206 1035 aaPredicted RBP4.77□□□□□ -1.65
SNX4-202ENST00000465505 DUSP10Q9Y6W6 482 aa4.77□□□□□ -1.65
SNX4-202ENST00000465505 THBDP07204 575 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 SARSP49591 514 aaKnown RBP4.76□□□□□ -1.65
SNX4-202ENST00000465505 ZNF143P52747 638 aaPredicted RBP4.76□□□□□ -1.65
SNX4-202ENST00000465505 INF2Q27J81 1249 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 GTF2IRD2BQ6EKJ0 949 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 POMZP3Q6PJE2 187 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 GTF2IRD2Q86UP8 949 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 ZBTB8AQ96BR9 441 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 DDX11Q96FC9 970 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 MRGPRX3Q96LB0 322 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 SYT3Q9BQG1 590 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 TGIF2Q9GZN2 237 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 ACBD3Q9H3P7 528 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 CYP26B1Q9NR63 512 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 USP40Q9NVE5 1235 aa4.76□□□□□ -1.65
SNX4-202ENST00000465505 ARNTLO00327 626 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 NOP56O00567 594 aaKnown RBP4.75□□□□□ -1.65
SNX4-202ENST00000465505 SGSM2O43147 1006 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 IGSF3O75054 1194 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 C8BP07358 591 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 RBM10P98175 930 aaKnown RBP4.75□□□□□ -1.65
SNX4-202ENST00000465505 ZNF761Q86XN6 746 aaPredicted RBP4.75□□□□□ -1.65
SNX4-202ENST00000465505 TRIM59Q8IWR1 403 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 CRACR2BQ8N4Y2 399 aaPredicted RBP4.75□□□□□ -1.65
SNX4-202ENST00000465505 FRS2Q8WU20 508 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 DDX1Q92499 740 aaKnown RBP4.75□□□□□ -1.65
SNX4-202ENST00000465505 GORASP1Q9BQQ3 440 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 LGR4Q9BXB1 951 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 LNPKQ9C0E8 428 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 NKX2-4Q9H2Z4 354 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 MARCH2Q9P0N8 246 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 NTMQ9P121 344 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 BCCIPQ9P287 314 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNX4-202ENST00000465505 CNOT11Q9UKZ1 510 aaKnown RBP4.75□□□□□ -1.65
SNX4-202ENST00000465505 STRIP2Q9ULQ0 834 aa4.75□□□□□ -1.65
SNX4-202ENST00000465505 ATF4P18848 351 aaPredicted RBP4.74□□□□□ -1.65
SNX4-202ENST00000465505 SMAD4Q13485 552 aaKnown RBP4.74□□□□□ -1.65
SNX4-202ENST00000465505 NCAPHQ15003 741 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 HHIPL2Q6UWX4 724 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 TTLL7Q6ZT98 887 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 MIB1Q86YT6 1006 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 TEX2Q8IWB9 1127 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 NPLOC4Q8TAT6 608 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 ANAPC16Q96DE5 110 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 C11orf84Q9BUA3 381 aaPredicted RBP4.74□□□□□ -1.65
SNX4-202ENST00000465505 INPP5FQ9Y2H2 1132 aa4.74□□□□□ -1.65
SNX4-202ENST00000465505 UNCXA6NJT0 531 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms