RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 PPP2R5BQ15173 497 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 PFKFB3Q16875 520 aaPredicted RBP13.44□□□□□ -0.26
CUX1-207ENST00000465461 GJC2Q5T442 439 aaPredicted RBP13.44□□□□□ -0.26
CUX1-207ENST00000465461 TAPT1Q6NXT6 567 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 DNERQ8NFT8 737 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 IL31RAQ8NI17 732 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 SMARCC2Q8TAQ2 1214 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 MORC4Q8TE76 937 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 PSTPIP2Q9H939 334 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 PXMP2Q9NR77 195 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
CUX1-207ENST00000465461 FRMPD3Q5JV73 1810 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 CPLX1O14810 134 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 PFKFB2O60825 505 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 FARP2O94887 1054 aaPredicted RBP13.43□□□□□ -0.26
CUX1-207ENST00000465461 MYCLP12524 364 aaPredicted RBP13.43□□□□□ -0.26
CUX1-207ENST00000465461 SCG2P13521 617 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 AKR1A1P14550 325 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 IFNAR1P17181 557 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 SMPD1P17405 629 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 EDNRBP24530 442 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 GHRHRQ02643 423 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 TRAF1Q13077 416 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 NSUN6Q8TEA1 469 aaKnown RBP13.43□□□□□ -0.26
CUX1-207ENST00000465461 PAWRQ96IZ0 340 aaKnown RBP13.43□□□□□ -0.26
CUX1-207ENST00000465461 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 AIFM3Q96NN9 605 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 UPF2Q9HAU5 1272 aaKnown RBP13.43□□□□□ -0.26
CUX1-207ENST00000465461 TMEM260Q9NX78 707 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 NRBP1Q9UHY1 535 aa13.43□□□□□ -0.26
CUX1-207ENST00000465461 BRCA2P51587 3418 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 MYADML2A6NDP7 307 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 SMCO2A6NFE2 343 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 NR3C2P08235 984 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 RARBP10826 455 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 AKAP17AQ02040 695 aaKnown RBP13.42□□□□□ -0.26
CUX1-207ENST00000465461 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 SSRP1Q08945 709 aaKnown RBP13.42□□□□□ -0.26
CUX1-207ENST00000465461 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 PGM5Q15124 567 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 SEPT14Q6ZU15 432 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 CUL5Q93034 780 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 TBC1D32Q96NH3 1257 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
CUX1-207ENST00000465461 XPNPEP3Q9NQH7 507 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 VPS54Q9P1Q0 977 aa13.42□□□□□ -0.26
CUX1-207ENST00000465461 MSCO60682 206 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 ARIH2O95376 493 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 MLLT1Q03111 559 aaPredicted RBP13.41□□□□□ -0.26
CUX1-207ENST00000465461 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 COPS5Q92905 334 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 WDR11Q9BZH6 1224 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 VTA1Q9NP79 307 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 MAP3K20Q9NYL2 800 aaKnown RBP13.41□□□□□ -0.26
CUX1-207ENST00000465461 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
CUX1-207ENST00000465461 SYNRGQ9UMZ2 1314 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 DYNC1LI2O43237 492 aaPredicted RBP13.4□□□□□ -0.26
CUX1-207ENST00000465461 SORBS3O60504 671 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
CUX1-207ENST00000465461 ADCY7P51828 1080 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 BEX3Q00994 111 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 LRRC41Q15345 812 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 STXBP2Q15833 593 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 IQSEC1Q6DN90 963 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 SAMD3Q8N6K7 520 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 FERMT2Q96AC1 680 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 IWS1Q96ST2 819 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 MPHOSPH6Q99547 160 aaKnown RBP13.4□□□□□ -0.26
CUX1-207ENST00000465461 MAF1Q9H063 256 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 RIC8AQ9NPQ8 531 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 GNEQ9Y223 722 aaKnown RBP13.4□□□□□ -0.26
CUX1-207ENST00000465461 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
CUX1-207ENST00000465461 LOC102724159A0A0B4J2E5 919 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 JAK2O60674 1132 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 ADAMTS4O75173 837 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
CUX1-207ENST00000465461 RGS20O76081 388 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
CUX1-207ENST00000465461 MRPS9P82933 396 aaKnown RBP13.39□□□□□ -0.27
CUX1-207ENST00000465461 PWP2Q15269 919 aaKnown RBP13.39□□□□□ -0.27
CUX1-207ENST00000465461 RABEP1Q15276 862 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 LY6KQ17RY6 165 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
CUX1-207ENST00000465461 VSIG10LQ86VR7 867 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 CCDC83Q8IWF9 413 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 TRIM22Q8IYM9 498 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 RASGRP4Q8TDF6 673 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
CUX1-207ENST00000465461 C11orf49Q9H6J7 331 aa13.39□□□□□ -0.27
CUX1-207ENST00000465461 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms