RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 RBM28Q9NW13 759 aaKnown RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
COL28A1-206ENST00000465339 BRPF3Q9ULD4 1205 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 ALPK3Q96L96 1907 aa15.09■□□□□ 0.01
COL28A1-206ENST00000465339 PGK1P00558 417 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 RPS6KB1P23443 525 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 EDNRBP24530 442 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 HSD17B4P51659 736 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 PDE4DQ08499 809 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 TAPT1Q6NXT6 567 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 Q6ZUG5 572 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 MICU3Q86XE3 530 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 SRBD1Q8N5C6 995 aaKnown RBP15.08■□□□□ 0
COL28A1-206ENST00000465339 TAAR1Q96RJ0 339 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 IWS1Q96ST2 819 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 LRRC37A2A6NM11 1700 aa15.08■□□□□ 0
COL28A1-206ENST00000465339 MKI67P46013 3256 aaKnown RBP15.07■□□□□ 0
COL28A1-206ENST00000465339 KLF18A0A0U1RQI7 1052 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 OPLAHO14841 1288 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 ADAMTS4O75173 837 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 CPA1P15085 419 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 CASTP20810 708 aaKnown RBP15.07■□□□□ 0
COL28A1-206ENST00000465339 GJA9P57773 515 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 TMTC3Q6ZXV5 915 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 RUFY3Q7L099 469 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 EEPD1Q7L9B9 569 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 CMTR1Q8N1G2 835 aaKnown RBP15.07■□□□□ 0
COL28A1-206ENST00000465339 RMDN3Q96TC7 470 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 TM6SF1Q9BZW5 370 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
COL28A1-206ENST00000465339 ZSWIM6Q9HCJ5 1215 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 COL20A1Q9P218 1284 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 PHF24Q9UPV7 400 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 Q9Y3F1 56 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 SYNRGQ9UMZ2 1314 aa15.07■□□□□ 0
COL28A1-206ENST00000465339 CCDC196A0A1B0GTZ2 297 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 RBM47A0AV96 593 aaKnown RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 TTLL13PA6NNM8 815 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 GCOM1H8Y6P7 765 aaPredicted RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 POLR2MP0CAP2 368 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 CST5P28325 142 aaPredicted RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 ADCYAP1R1P41586 468 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 ATN1P54259 1190 aaPredicted RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 NKX3-2P78367 333 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 STXBP2Q15833 593 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 RTN1Q16799 776 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 ARHGEF16Q5VV41 709 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 NOL8Q76FK4 1167 aaKnown RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 RAB11FIP4Q86YS3 637 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 FBXO16Q8IX29 292 aaPredicted RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 PCSK9Q8NBP7 692 aaKnown RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 KLHDC9Q8NEP7 349 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 PIBF1Q8WXW3 757 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 LENG1Q96BZ8 264 aaPredicted RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 PDGFCQ9NRA1 345 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 CYP46A1Q9Y6A2 500 aa15.06■□□□□ 0
COL28A1-206ENST00000465339 DDX49Q9Y6V7 483 aaKnown RBP15.06■□□□□ 0
COL28A1-206ENST00000465339 KIAA1217Q5T5P2 1943 aa15.05■□□□□ 0
COL28A1-206ENST00000465339 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.05■□□□□ -0
COL28A1-206ENST00000465339 MOXD2PA6NHM9 499 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 GOLGA8AA7E2F4 631 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 GOLGA8BA8MQT2 603 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 H0YGN5 161 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 ADCY6O43306 1168 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 C6orf222P0C671 652 aaPredicted RBP15.05■□□□□ -0
COL28A1-206ENST00000465339 SMPD1P17405 629 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 APOBRQ0VD83 1088 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 LRRC26Q2I0M4 334 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 SLC39A5Q6ZMH5 540 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 BRF1Q92994 677 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 RNF25Q96BH1 459 aaPredicted RBP15.05■□□□□ -0
COL28A1-206ENST00000465339 WDR11Q9BZH6 1224 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 AP5M1Q9H0R1 490 aa15.05■□□□□ -0
COL28A1-206ENST00000465339 NAP1L2Q9ULW6 460 aaPredicted RBP15.05■□□□□ -0
COL28A1-206ENST00000465339 GNEQ9Y223 722 aaKnown RBP15.05■□□□□ -0
COL28A1-206ENST00000465339 NKRFO15226 690 aaKnown RBP eCLIP15.04■□□□□ -0
COL28A1-206ENST00000465339 NR3C2P08235 984 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
COL28A1-206ENST00000465339 ACLYP53396 1101 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 EVCP57679 992 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 ANAPC15P60006 121 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 NBR1Q14596 966 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 KCNA10Q16322 511 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 DUSP28Q4G0W2 176 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 GNASQ5JWF2 1037 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 CCSAPQ6IQ19 270 aaPredicted RBP15.04■□□□□ -0
COL28A1-206ENST00000465339 SCFD2Q8WU76 684 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 FERMT2Q96AC1 680 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 PXMP2Q9NR77 195 aa15.04■□□□□ -0
COL28A1-206ENST00000465339 DYNC1LI2O43237 492 aaPredicted RBP15.03■□□□□ -0
COL28A1-206ENST00000465339 EIF3JO75822 258 aaKnown RBP15.03■□□□□ -0
COL28A1-206ENST00000465339 METAP2P50579 478 aaKnown RBP eCLIP15.03■□□□□ -0
COL28A1-206ENST00000465339 C1orf53Q5VUE5 145 aa15.03■□□□□ -0
COL28A1-206ENST00000465339 TLK2Q86UE8 772 aa15.03■□□□□ -0
COL28A1-206ENST00000465339 C7orf61Q8IZ16 206 aa15.03■□□□□ -0
COL28A1-206ENST00000465339 CUL5Q93034 780 aa15.03■□□□□ -0
COL28A1-206ENST00000465339 FAM217BQ9NTX9 383 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms