RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 ZNF76P36508 570 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 HERVK_113P62684 666 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 GPSM2P81274 684 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
CCDC115-204ENST00000465315 CD209Q9NNX6 404 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 SEPT11Q9NVA2 429 aaKnown RBP12.68□□□□□ -0.38
CCDC115-204ENST00000465315 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
CCDC115-204ENST00000465315 RHOBTB3O94955 611 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 CLSTN1O94985 981 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 CACNB3P54284 484 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 MYO1AQ9UBC5 1043 aa12.68□□□□□ -0.38
CCDC115-204ENST00000465315 RNF40O75150 1001 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 POLR2FP61218 127 aaKnown RBP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 GRAPQ13588 217 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 USH1GQ495M9 461 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 DCAF17Q5H9S7 520 aaPredicted RBP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 GRAPLQ8TC17 118 aaPredicted RBP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 DDX12PQ92771 950 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 SPAG5Q96R06 1193 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 LZTS2Q9BRK4 669 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 MXD3Q9BW11 206 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 REXO2Q9Y3B8 237 aaKnown RBP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 MYMKA6NI61 221 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 TMCO5BA8MYB1 307 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 MCM3P25205 808 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 KIF11P52732 1056 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 HLTFQ14527 1009 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 SLF2Q8IX21 1173 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 ZC3H12CQ9C0D7 883 aaKnown RBP12.67□□□□□ -0.38
CCDC115-204ENST00000465315 CCSER1Q9C0I3 900 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 KIAA1024Q9UPX6 916 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 NUP188Q5SRE5 1749 aa12.67□□□□□ -0.38
CCDC115-204ENST00000465315 RCCD1A6NED2 376 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 LRRIQ3A6PVS8 624 aaPredicted RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 PLCG2P16885 1265 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 GALNT17Q6IS24 598 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 DUSP9Q99956 384 aaKnown RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 PCDHA12Q9UN75 941 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 LEMD3Q9Y2U8 911 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 SRGNP10124 158 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 C4orf32Q8N8J7 132 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 GLIS3Q8NEA6 775 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP40Q9NVE5 1235 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 KBTBD4Q9NVX7 518 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L15C9J2P7 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L13C9JLJ4 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L11C9JVI0 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L18D6R9N7 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L22D6RA61 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L17D6RBQ6 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L19D6RCP7 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L20D6RJB6 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 MEIS1O00470 390 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 NKRFO15226 690 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 SLC37A4O43826 429 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L24Q0WX57 530 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 KCNB1Q14721 858 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 KCTD19Q17RG1 926 aaPredicted RBP12.66□□□□□ -0.38
CCDC115-204ENST00000465315 VWA3BQ502W6 1294 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 TAF4BQ92750 862 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 AK8Q96MA6 479 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 FAM107BQ9H098 131 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 L1RE1Q9UN81 338 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 PCDHA13Q9Y5I0 950 aa12.66□□□□□ -0.38
CCDC115-204ENST00000465315 LRRC10BA6NIK2 292 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 LAD1O00515 517 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 FTCDO95954 541 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 AKR1B1P15121 316 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 WDR59Q6PJI9 974 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 MYOCDQ8IZQ8 938 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 LUC7LQ9NQ29 371 aaKnown RBP12.65□□□□□ -0.38
CCDC115-204ENST00000465315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.65□□□□□ -0.38
CCDC115-204ENST00000465315 MYH7P12883 1935 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 NPHP3-ACAD11A0A0J9YXS1 232 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 PALM3A6NDB9 673 aaPredicted RBP12.65□□□□□ -0.38
CCDC115-204ENST00000465315 GOLGA6BA6NDN3 693 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 E9PMD0 336 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 KLRC4O43908 158 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 CYP4A11Q02928 519 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 SLC35G1Q2M3R5 365 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 TMED8Q6PL24 325 aaPredicted RBP12.65□□□□□ -0.38
CCDC115-204ENST00000465315 NUDT12Q9BQG2 462 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 PSTPIP2Q9H939 334 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 PANK4Q9NVE7 773 aa12.65□□□□□ -0.38
CCDC115-204ENST00000465315 PDS5AQ29RF7 1337 aaKnown RBP12.65□□□□□ -0.38
CCDC115-204ENST00000465315 MYH15Q9Y2K3 1946 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms