RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 MIIPQ5JXC2 388 aa20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 GLIS3Q8NEA6 775 aa20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 SNX29Q8TEQ0 813 aa20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 CCDC47Q96A33 483 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 ST7Q9NRC1 585 aa20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 ZNF219Q9P2Y4 722 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 LUC7L2Q9Y383 392 aaKnown RBP20.9■□□□□ 0.94
TSPAN4-210ENST00000464987 MYO3BQ8WXR4 1341 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 ZBTB5O15062 677 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 DNM2P50570 870 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 SEMA3FQ13275 785 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 OR8K1Q8NGG5 319 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 DNAJC7Q99615 494 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 TTYH3Q9C0H2 523 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 CAPN11Q9UMQ6 739 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 FHOD1Q9Y613 1164 aa20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 EPN1Q9Y6I3 576 aaPredicted RBP20.89■□□□□ 0.94
TSPAN4-210ENST00000464987 ZNF646O15015 1829 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 SLX4Q8IY92 1834 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 BICDL2A1A5D9 508 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L15C9J2P7 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L13C9JLJ4 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L11C9JVI0 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L18D6R9N7 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L22D6RA61 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L17D6RBQ6 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L19D6RCP7 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L20D6RJB6 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 NDUFA10O95299 355 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L24Q0WX57 530 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 TMEM266Q2M3C6 531 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 CNNM4Q6P4Q7 775 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 USP17L6PQ6QN14 398 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 MASTLQ96GX5 879 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 CDK5RAP3Q96JB5 506 aa20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 DDX25Q9UHL0 483 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 PUF60Q9UHX1 559 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-210ENST00000464987 TBC1D8BQ0IIM8 1120 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 SH3BP5LQ7L8J4 393 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 KRT222Q8N1A0 295 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 NOC3LQ8WTT2 800 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 RAD54LQ92698 747 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 CUL5Q93034 780 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 MTMR8Q96EF0 704 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 SMCHD1A6NHR9 2005 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 EEF2P13639 858 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 PDE6BP35913 854 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 MTIF2P46199 727 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 GPATCH4Q5T3I0 446 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 UNC13DQ70J99 1090 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 NOC4LQ9BVI4 516 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 STK17AQ9UEE5 414 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 FAM198AQ9UFP1 575 aa20.88■□□□□ 0.93
TSPAN4-210ENST00000464987 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 ZRANB2O95218 330 aaKnown RBP eCLIP20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 IDEP14735 1019 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 ERCC3P19447 782 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 RBM5P52756 815 aaKnown RBP eCLIP20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 KIF4BQ2VIQ3 1234 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 PPP4R3AQ6IN85 833 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 PPP1R18Q6NYC8 613 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 ZDHHC15Q96MV8 337 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 PSTPIP2Q9H939 334 aa20.87■□□□□ 0.93
TSPAN4-210ENST00000464987 TRIM21P19474 475 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 PDIA5Q14554 519 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 LRRC41Q15345 812 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 QRICH1Q2TAL8 776 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 CENPPQ6IPU0 288 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 DDX12PQ92771 950 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 SNAP25P60880 206 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 HERVK_113P62684 666 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 TMEM119Q4V9L6 283 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 KRT79Q5XKE5 535 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 SIAH1Q8IUQ4 282 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 EHD4Q9H223 541 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 CDC23Q9UJX2 597 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 GUCA1BQ9UMX6 200 aa20.86■□□□□ 0.93
TSPAN4-210ENST00000464987 PNMA6AP0CW24 399 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 DMTNQ08495 405 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 COBLL1Q53SF7 1204 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 PODNQ7Z5L7 613 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 PARD6BQ9BYG5 372 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 ATF5Q9Y2D1 282 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 CTAGE9A4FU28 777 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 TAL1P17542 331 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 MRPL12P52815 198 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 SEPT2Q15019 361 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 CERKLQ49MI3 558 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 TMCO3Q6UWJ1 677 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 ZSCAN29Q8IWY8 852 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 GPR161Q8N6U8 529 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 RAB34Q9BZG1 259 aa20.85■□□□□ 0.93
TSPAN4-210ENST00000464987 GDF11O95390 407 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 APBA3O96018 575 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 SLC1A4P43007 532 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 DACT2Q5SW24 774 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 GOLGA1Q92805 767 aa20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 PCMTD1Q96MG8 357 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-210ENST00000464987 P2RX7Q99572 595 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms