RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SUGCTQ9HAC7 445 aa11.4□□□□□ -0.58
APP-213ENST00000464867 TOR4AQ9NXH8 423 aa11.4□□□□□ -0.58
APP-213ENST00000464867 PARP14Q460N5 1801 aa11.39□□□□□ -0.59
APP-213ENST00000464867 FAM186AA6NE01 2351 aa11.39□□□□□ -0.59
APP-213ENST00000464867 VWA5AO00534 786 aa11.39□□□□□ -0.59
APP-213ENST00000464867 TECTAO75443 2155 aa11.39□□□□□ -0.59
APP-213ENST00000464867 POLR3DP05423 398 aaPredicted RBP11.39□□□□□ -0.59
APP-213ENST00000464867 SHMT1P34896 483 aa11.39□□□□□ -0.59
APP-213ENST00000464867 MCAMP43121 646 aa11.39□□□□□ -0.59
APP-213ENST00000464867 ID4P47928 161 aa11.39□□□□□ -0.59
APP-213ENST00000464867 DYNLL1P63167 89 aaKnown RBP11.39□□□□□ -0.59
APP-213ENST00000464867 NKX3-2P78367 333 aa11.39□□□□□ -0.59
APP-213ENST00000464867 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
APP-213ENST00000464867 PTPROQ16827 1216 aa11.39□□□□□ -0.59
APP-213ENST00000464867 HERC4Q5GLZ8 1057 aaPredicted RBP11.39□□□□□ -0.59
APP-213ENST00000464867 ZNF787Q6DD87 383 aa11.39□□□□□ -0.59
APP-213ENST00000464867 TMEM179Q6ZVK1 233 aa11.39□□□□□ -0.59
APP-213ENST00000464867 ADGRA1Q86SQ6 560 aa11.39□□□□□ -0.59
APP-213ENST00000464867 FAM86C1Q9NVL1 165 aa11.39□□□□□ -0.59
APP-213ENST00000464867 MUTYHQ9UIF7 546 aa11.39□□□□□ -0.59
APP-213ENST00000464867 ADAMTS5Q9UNA0 930 aa11.39□□□□□ -0.59
APP-213ENST00000464867 CTAGE5O15320 804 aa11.38□□□□□ -0.59
APP-213ENST00000464867 ADCY6O43306 1168 aa11.38□□□□□ -0.59
APP-213ENST00000464867 FDX1P10109 184 aa11.38□□□□□ -0.59
APP-213ENST00000464867 NDUFV2P19404 249 aa11.38□□□□□ -0.59
APP-213ENST00000464867 CYP7A1P22680 504 aa11.38□□□□□ -0.59
APP-213ENST00000464867 IRS1P35568 1242 aa11.38□□□□□ -0.59
APP-213ENST00000464867 ERVK-21P61565 698 aa11.38□□□□□ -0.59
APP-213ENST00000464867 ANKRD35Q8N283 1001 aa11.38□□□□□ -0.59
APP-213ENST00000464867 MAGEB6Q8N7X4 407 aa11.38□□□□□ -0.59
APP-213ENST00000464867 VWCEQ96DN2 955 aa11.38□□□□□ -0.59
APP-213ENST00000464867 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
APP-213ENST00000464867 ALDH8A1Q9H2A2 487 aaPredicted RBP11.38□□□□□ -0.59
APP-213ENST00000464867 VCPKMTQ9H867 229 aa11.38□□□□□ -0.59
APP-213ENST00000464867 SNRKQ9NRH2 765 aa11.38□□□□□ -0.59
APP-213ENST00000464867 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
APP-213ENST00000464867 CTDP1Q9Y5B0 961 aaPredicted RBP11.38□□□□□ -0.59
APP-213ENST00000464867 TNKSO95271 1327 aa11.37□□□□□ -0.59
APP-213ENST00000464867 SIP14410 1827 aa11.37□□□□□ -0.59
APP-213ENST00000464867 LCHNA4D1U4 455 aa11.37□□□□□ -0.59
APP-213ENST00000464867 TMEM221A6NGB7 291 aa11.37□□□□□ -0.59
APP-213ENST00000464867 M0R296 226 aa11.37□□□□□ -0.59
APP-213ENST00000464867 TRIM66O15016 1216 aa11.37□□□□□ -0.59
APP-213ENST00000464867 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
APP-213ENST00000464867 CYP2C9P11712 490 aa11.37□□□□□ -0.59
APP-213ENST00000464867 PSMC6P62333 389 aa11.37□□□□□ -0.59
APP-213ENST00000464867 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
APP-213ENST00000464867 TIGD5Q53EQ6 642 aa11.37□□□□□ -0.59
APP-213ENST00000464867 KIAA1755Q5JYT7 1200 aa11.37□□□□□ -0.59
APP-213ENST00000464867 CCDC158Q5M9N0 1113 aa11.37□□□□□ -0.59
APP-213ENST00000464867 TTC39AQ5SRH9 613 aa11.37□□□□□ -0.59
APP-213ENST00000464867 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
APP-213ENST00000464867 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
APP-213ENST00000464867 SPRED2Q7Z698 418 aa11.37□□□□□ -0.59
APP-213ENST00000464867 TLK2Q86UE8 772 aa11.37□□□□□ -0.59
APP-213ENST00000464867 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
APP-213ENST00000464867 PABPC5Q96DU9 382 aaKnown RBP11.37□□□□□ -0.59
APP-213ENST00000464867 RAD9AQ99638 391 aa11.37□□□□□ -0.59
APP-213ENST00000464867 TRMT13Q9NUP7 481 aaKnown RBP11.37□□□□□ -0.59
APP-213ENST00000464867 ZNF214Q9UL59 606 aaPredicted RBP11.37□□□□□ -0.59
APP-213ENST00000464867 MYH8P13535 1937 aa11.37□□□□□ -0.59
APP-213ENST00000464867 GRIN2DO15399 1336 aa11.36□□□□□ -0.59
APP-213ENST00000464867 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
APP-213ENST00000464867 DYNC1LI2O43237 492 aaPredicted RBP11.36□□□□□ -0.59
APP-213ENST00000464867 RAD21O60216 631 aa11.36□□□□□ -0.59
APP-213ENST00000464867 JUNDP17535 347 aa11.36□□□□□ -0.59
APP-213ENST00000464867 PLCD1P51178 756 aa11.36□□□□□ -0.59
APP-213ENST00000464867 ICA1Q05084 483 aa11.36□□□□□ -0.59
APP-213ENST00000464867 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
APP-213ENST00000464867 RNF135Q8IUD6 432 aa11.36□□□□□ -0.59
APP-213ENST00000464867 FBXL6Q8N531 539 aa11.36□□□□□ -0.59
APP-213ENST00000464867 MIGA1Q8NAN2 632 aa11.36□□□□□ -0.59
APP-213ENST00000464867 MRPL38Q96DV4 380 aaKnown RBP11.36□□□□□ -0.59
APP-213ENST00000464867 PRKRIP1Q9H875 184 aaPredicted RBP11.36□□□□□ -0.59
APP-213ENST00000464867 PPP1R9AQ9ULJ8 1098 aa11.36□□□□□ -0.59
APP-213ENST00000464867 EPG5Q9HCE0 2579 aa11.35□□□□□ -0.59
APP-213ENST00000464867 NCK2O43639 380 aa11.35□□□□□ -0.59
APP-213ENST00000464867 IQCF3P0C7M6 154 aa11.35□□□□□ -0.59
APP-213ENST00000464867 BFSP2Q13515 415 aa11.35□□□□□ -0.59
APP-213ENST00000464867 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
APP-213ENST00000464867 BANK1Q8NDB2 785 aa11.35□□□□□ -0.59
APP-213ENST00000464867 GOPCQ9HD26 462 aa11.35□□□□□ -0.59
APP-213ENST00000464867 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
APP-213ENST00000464867 NOD1Q9Y239 953 aa11.35□□□□□ -0.59
APP-213ENST00000464867 MYO5AQ9Y4I1 1855 aaKnown RBP11.35□□□□□ -0.59
APP-213ENST00000464867 LINC01553A4QN01 128 aa11.34□□□□□ -0.59
APP-213ENST00000464867 WNT7AO00755 349 aa11.34□□□□□ -0.59
APP-213ENST00000464867 SRGAP3O43295 1099 aa11.34□□□□□ -0.59
APP-213ENST00000464867 CYP2E1P05181 493 aaPredicted RBP11.34□□□□□ -0.59
APP-213ENST00000464867 WDR5P61964 334 aaKnown RBP11.34□□□□□ -0.59
APP-213ENST00000464867 FAM47CQ5HY64 1035 aa11.34□□□□□ -0.59
APP-213ENST00000464867 CYP4X1Q8N118 509 aa11.34□□□□□ -0.59
APP-213ENST00000464867 TET1Q8NFU7 2136 aa11.34□□□□□ -0.59
APP-213ENST00000464867 AAASQ9NRG9 546 aa11.34□□□□□ -0.59
APP-213ENST00000464867 POLR3EQ9NVU0 708 aa11.34□□□□□ -0.59
APP-213ENST00000464867 CLDND1Q9NY35 253 aa11.34□□□□□ -0.59
APP-213ENST00000464867 SWAP70Q9UH65 585 aa11.34□□□□□ -0.59
APP-213ENST00000464867 FBXO40Q9UH90 709 aa11.34□□□□□ -0.59
APP-213ENST00000464867 GNEQ9Y223 722 aaKnown RBP11.34□□□□□ -0.59
APP-213ENST00000464867 Q9Y3F1 56 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms