RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DCAF4Q8WV16 495 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 SLC38A3Q99624 504 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 ZFYVE21Q9BQ24 234 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 ZNF552Q9H707 407 aaPredicted RBP6.11□□□□□ -1.43
CLK1-208ENST00000464454 GPR27Q9NS67 375 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 GULP1Q9UBP9 304 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 NUDT5Q9UKK9 219 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 RWDD3Q9Y3V2 267 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 NPFFR2Q9Y5X5 522 aa6.11□□□□□ -1.43
CLK1-208ENST00000464454 ARID1BQ8NFD5 2236 aaPredicted RBP6.1□□□□□ -1.43
CLK1-208ENST00000464454 CCDC163A0A0D9SF12 145 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 DBHP09172 617 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 TACR1P25103 407 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 RAB3GAP1Q15042 981 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 INF2Q27J81 1249 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 C2orf27AQ580R0 203 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 LCE1DQ5T752 114 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 YOD1Q5VVQ6 348 aaPredicted RBP6.1□□□□□ -1.43
CLK1-208ENST00000464454 OGFOD2Q6N063 350 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 ZNF605Q86T29 641 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 NETO2Q8NC67 525 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 FAM84AQ96KN4 292 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 PPP1R16BQ96T49 567 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 MTA3Q9BTC8 594 aa6.1□□□□□ -1.43
CLK1-208ENST00000464454 TMEFF2Q9UIK5 374 aaPredicted RBP6.1□□□□□ -1.43
CLK1-208ENST00000464454 CADPSQ9ULU8 1353 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 NUDT19A8MXV4 375 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 SEMA7AO75326 666 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 FAM153BP0C7A2 387 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 GLI4P10075 376 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 MAPKAPK2P49137 400 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 YBX1P67809 324 aaKnown RBP6.09□□□□□ -1.43
CLK1-208ENST00000464454 CBX2Q14781 532 aaPredicted RBP6.09□□□□□ -1.43
CLK1-208ENST00000464454 DENND5AQ6IQ26 1287 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 RCBTB1Q8NDN9 531 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 BHLHE22Q8NFJ8 381 aaPredicted RBP6.09□□□□□ -1.43
CLK1-208ENST00000464454 DHRS4Q9BTZ2 278 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 MARCH2Q9P0N8 246 aa6.09□□□□□ -1.43
CLK1-208ENST00000464454 H7BY64 318 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 FUCA1P04066 466 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 APPP05067 770 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 CANXP27824 592 aaKnown RBP6.08□□□□□ -1.44
CLK1-208ENST00000464454 LSAMPQ13449 338 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 PKN1Q16512 942 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 MROH9Q5TGP6 573 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 WWC2Q6AWC2 1192 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 TMEM132EQ6IEE7 984 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 STYK1Q6J9G0 422 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 ZC3H14Q6PJT7 736 aaKnown RBP6.08□□□□□ -1.44
CLK1-208ENST00000464454 RPTNQ6XPR3 784 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 MAMDC2Q7Z304 686 aaPredicted RBP6.08□□□□□ -1.44
CLK1-208ENST00000464454 DCP2Q8IU60 420 aaKnown RBP6.08□□□□□ -1.44
CLK1-208ENST00000464454 RIOX2Q8IUF8 465 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 Q8N1Y9 231 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 TMEM169Q96HH4 297 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 PHF20Q9BVI0 1012 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 BTG4Q9NY30 223 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 KLHL14Q9P2G3 628 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 DBR1Q9UK59 544 aaKnown RBP6.08□□□□□ -1.44
CLK1-208ENST00000464454 COA3Q9Y2R0 106 aaPredicted RBP6.08□□□□□ -1.44
CLK1-208ENST00000464454 TBX22Q9Y458 520 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 PCDHA2Q9Y5H9 948 aa6.08□□□□□ -1.44
CLK1-208ENST00000464454 TEX51A0A1B0GUA7 166 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 C22orf46C9J442 243 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 AQP7O14520 342 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 NAT1P18440 290 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 SDHBP21912 280 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 GPR85P60893 370 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 GABREP78334 506 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 SRSF3P84103 164 aaKnown RBP6.07□□□□□ -1.44
CLK1-208ENST00000464454 KIZQ2M2Z5 673 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
CLK1-208ENST00000464454 FAM209AQ5JX71 171 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 CEP68Q76N32 757 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 IFNL3Q8IZI9 196 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.07□□□□□ -1.443e-7■■■□□ 17.3
CLK1-208ENST00000464454 PLEKHO2Q8TD55 490 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 DPF3Q92784 378 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 PTPRN2Q92932 1015 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 TRMT2BQ96GJ1 504 aaKnown RBP6.07□□□□□ -1.44
CLK1-208ENST00000464454 PEX11GQ96HA9 241 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 CHAMP1Q96JM3 812 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 AP5M1Q9H0R1 490 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 SIRT5Q9NXA8 310 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 MRPS23Q9Y3D9 190 aaKnown RBP6.07□□□□□ -1.44
CLK1-208ENST00000464454 X6R8D5 127 aa6.07□□□□□ -1.44
CLK1-208ENST00000464454 F8W031 263 aaPredicted RBP6.06□□□□□ -1.44
CLK1-208ENST00000464454 ARNTLO00327 626 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 PPP1R11O60927 126 aaPredicted RBP6.06□□□□□ -1.44
CLK1-208ENST00000464454 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 LCP1P13796 627 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 VIPR1P32241 457 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 BCL6P41182 706 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 MESP2Q0VG99 397 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 SLC9A5Q14940 896 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 CHRNA2Q15822 529 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 NTRK3Q16288 839 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms