RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 FCHSD1Q86WN1 690 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 IL27Q8NEV9 243 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 KIF2CQ99661 725 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 ALDH8A1Q9H2A2 487 aaPredicted RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 V9GY48 417 aaPredicted RBP19.66■□□□□ 0.74
VPS52-215ENST00000464425 SYNRGQ9UMZ2 1314 aa19.66■□□□□ 0.74
VPS52-215ENST00000464425 FRMPD3Q5JV73 1810 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 ADAMTS4O75173 837 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 GHRHRQ02643 423 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 FUT2Q10981 343 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 IQSEC1Q6DN90 963 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 HEATR3Q7Z4Q2 680 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 FERMT2Q96AC1 680 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 PXMP2Q9NR77 195 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 MAP3K20Q9NYL2 800 aaKnown RBP19.65■□□□□ 0.74
VPS52-215ENST00000464425 CNTNAP5Q8WYK1 1306 aa19.65■□□□□ 0.74
VPS52-215ENST00000464425 CCDC196A0A1B0GTZ2 297 aa19.64■□□□□ 0.73
VPS52-215ENST00000464425 MYADML2A6NDP7 307 aa19.64■□□□□ 0.73
VPS52-215ENST00000464425 EVI5O60447 810 aa19.64■□□□□ 0.73
VPS52-215ENST00000464425 C6orf222P0C671 652 aaPredicted RBP19.64■□□□□ 0.73
VPS52-215ENST00000464425 PDIA3P30101 505 aaKnown RBP19.64■□□□□ 0.73
VPS52-215ENST00000464425 ATN1P54259 1190 aaPredicted RBP19.64■□□□□ 0.73
VPS52-215ENST00000464425 CCT2P78371 535 aaKnown RBP19.64■□□□□ 0.73
VPS52-215ENST00000464425 SAMD3Q8N6K7 520 aa19.64■□□□□ 0.73
VPS52-215ENST00000464425 GPKOWQ92917 476 aaPredicted RBP eCLIP19.64■□□□□ 0.73
VPS52-215ENST00000464425 IWS1Q96ST2 819 aa19.64■□□□□ 0.73
VPS52-215ENST00000464425 WDR11Q9BZH6 1224 aa19.64■□□□□ 0.73
VPS52-215ENST00000464425 DYNC1LI2O43237 492 aaPredicted RBP19.63■□□□□ 0.73
VPS52-215ENST00000464425 PPFIA3O75145 1194 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 EVCP57679 992 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 PPP2R5BQ15173 497 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 USP17L6PQ6QN14 398 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 SEPT14Q6ZU15 432 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 KLHDC9Q8NEP7 349 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 SPC25Q9HBM1 224 aa19.63■□□□□ 0.73
VPS52-215ENST00000464425 GNEQ9Y223 722 aaKnown RBP19.63■□□□□ 0.73
VPS52-215ENST00000464425 NR3C2P08235 984 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 MYCLP12524 364 aaPredicted RBP19.62■□□□□ 0.73
VPS52-215ENST00000464425 GJA9P57773 515 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 STXBP2Q15833 593 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 KCNA10Q16322 511 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 LRRC26Q2I0M4 334 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 WWC2Q6AWC2 1192 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 TLK2Q86UE8 772 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 SMARCC2Q8TAQ2 1214 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 CUL5Q93034 780 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 AP5M1Q9H0R1 490 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 UPF3AQ9H1J1 476 aaKnown RBP19.62■□□□□ 0.73
VPS52-215ENST00000464425 PSTPIP2Q9H939 334 aa19.62■□□□□ 0.73
VPS52-215ENST00000464425 NCOA5Q9HCD5 579 aaKnown RBP19.62■□□□□ 0.73
VPS52-215ENST00000464425 RBM47A0AV96 593 aaKnown RBP19.61■□□□□ 0.73
VPS52-215ENST00000464425 H0YGN5 161 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 NEK4P51957 841 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 BEX3Q00994 111 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 DUSP28Q4G0W2 176 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 GNASQ5JWF2 1037 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 C7orf61Q8IZ16 206 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 ZFP91Q96JP5 570 aaPredicted RBP19.61■□□□□ 0.73
VPS52-215ENST00000464425 PDCD2LQ9BRP1 358 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 PHF24Q9UPV7 400 aa19.61■□□□□ 0.73
VPS52-215ENST00000464425 MEIS2O14770 477 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 CTAGE5O15320 804 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 ACLYP53396 1101 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 NAPAP54920 295 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 STK3Q13188 491 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 PGM5Q15124 567 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 RABEP1Q15276 862 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 ANKRD1Q15327 319 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 PRPF38BQ5VTL8 546 aaKnown RBP19.6■□□□□ 0.73
VPS52-215ENST00000464425 CCSAPQ6IQ19 270 aaPredicted RBP19.6■□□□□ 0.73
VPS52-215ENST00000464425 IL31RAQ8NI17 732 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 SCFD2Q8WU76 684 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 PHKBQ93100 1093 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 TSEN34Q9BSV6 310 aaKnown RBP19.6■□□□□ 0.73
VPS52-215ENST00000464425 NR2E3Q9Y5X4 410 aa19.6■□□□□ 0.73
VPS52-215ENST00000464425 NID2Q14112 1375 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 PIK3CDO00329 1044 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 EIF3JO75822 258 aaKnown RBP19.59■□□□□ 0.73
VPS52-215ENST00000464425 TXNP10599 105 aaKnown RBP19.59■□□□□ 0.73
VPS52-215ENST00000464425 TTLL4Q14679 1199 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 FSCN1Q16658 493 aaKnown RBP19.59■□□□□ 0.73
VPS52-215ENST00000464425 UBE2SQ16763 222 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 TYW1BQ6NUM6 668 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 SLC39A5Q6ZMH5 540 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 PCSK9Q8NBP7 692 aaKnown RBP19.59■□□□□ 0.73
VPS52-215ENST00000464425 COPS5Q92905 334 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 ZNF274Q96GC6 653 aaPredicted RBP19.59■□□□□ 0.73
VPS52-215ENST00000464425 Q9Y3F1 56 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 LRRC37A2A6NM11 1700 aa19.59■□□□□ 0.73
VPS52-215ENST00000464425 A0A1W2PQ45 241 aaPredicted RBP19.58■□□□□ 0.72
VPS52-215ENST00000464425 A0A1W2PQY0 241 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 STXBP3O00186 592 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 ARIH2O95376 493 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 ASGR1P07306 291 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 CST5P28325 142 aaPredicted RBP19.58■□□□□ 0.72
VPS52-215ENST00000464425 CCND2P30279 289 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 NTRK3Q16288 839 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 VSIG10LQ86VR7 867 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 OR6J1Q8NGC5 347 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 VTI1AQ96AJ9 217 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms