RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MARCH6O60337 910 aa24.41■■□□□ 1.5
PDLIM2-216ENST00000464275 RHOBTB3O94955 611 aa24.41■■□□□ 1.5
PDLIM2-216ENST00000464275 CCZ1BP86790 482 aa24.41■■□□□ 1.5
PDLIM2-216ENST00000464275 CCZ1P86791 482 aaPredicted RBP24.41■■□□□ 1.5
PDLIM2-216ENST00000464275 GRB10Q13322 594 aa24.41■■□□□ 1.5
PDLIM2-216ENST00000464275 HAS1Q92839 578 aa24.41■■□□□ 1.5
PDLIM2-216ENST00000464275 SKILP12757 684 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 PAK1Q13153 545 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 HSP90AA4PQ58FG1 418 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 CDKAL1Q5VV42 579 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 KRT79Q5XKE5 535 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 ZNF710Q8N1W2 664 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 CDK5RAP3Q96JB5 506 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 GTPBP4Q9BZE4 634 aaKnown RBP24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 FAM160B2Q86V87 743 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 CRYGNQ8WXF5 182 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 C16orf45Q96MC5 204 aaPredicted RBP24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 PNMA5Q96PV4 448 aa24.4■■□□□ 1.5
PDLIM2-216ENST00000464275 FZD9O00144 591 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 GMPSP49915 693 aaPredicted RBP24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 RASSF7Q02833 373 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 ARMCX5Q6P1M9 558 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 ANKRD7Q92527 254 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 TRIM9Q9C026 710 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 INTS13Q9NVM9 706 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 GDAQ9Y2T3 454 aa24.39■■□□□ 1.49
PDLIM2-216ENST00000464275 POTEMA6NI47 508 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 SPDYE3A6NKU9 549 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 TUBB4AP04350 444 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 SFPQP23246 707 aaKnown RBP eCLIP24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 PRCPP42785 496 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 SV2BQ7L1I2 683 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 ADSSL1Q8N142 457 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 SNX29Q8TEQ0 813 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 NELFBQ8WX92 580 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 TEPSINQ96N21 525 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 RANBP17Q9H2T7 1088 aaKnown RBP24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 PCDHA12Q9UN75 941 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 DOCK1Q14185 1865 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 ARHGAP4P98171 946 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 STIM1Q13586 685 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 MICALL2Q8IY33 904 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 GIMAP8Q8ND71 665 aaPredicted RBP24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 CTAGE1Q96RT6 745 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 GINM1Q9NU53 330 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 FEM1BQ9UK73 627 aa24.38■■□□□ 1.49
PDLIM2-216ENST00000464275 A0A1B0GTH6 734 aa24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 PIK3CDO00329 1044 aa24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 SLC26A4O43511 780 aa24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 NR1I3Q14994 352 aa24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 KCNMB3Q9NPA1 279 aa24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 BLOC1S4Q9NUP1 217 aa24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 CNOT7Q9UIV1 285 aaKnown RBP24.37■■□□□ 1.49
PDLIM2-216ENST00000464275 OPLAHO14841 1288 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 EGFRP00533 1210 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 SREBF1P36956 1147 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 PTGER2P43116 358 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 TMEM119Q4V9L6 283 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 NYAP1Q6ZVC0 841 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 CCDC112Q8NEF3 446 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 P2RX7Q99572 595 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 GJA3Q9Y6H8 435 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 ASIC1P78348 528 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 ZYXQ15942 572 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 CEP135Q66GS9 1140 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 SLFN12Q8IYM2 578 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 LARP4BQ92615 738 aaKnown RBP24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 LRRC27Q9C0I9 530 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 EXOC1Q9NV70 894 aa24.36■■□□□ 1.49
PDLIM2-216ENST00000464275 SPAG1Q07617 926 aa24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 PTPN14Q15678 1187 aa24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 Q4G0T1 1027 aa24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 APTXQ7Z2E3 356 aaKnown RBP24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 RAD54LQ92698 747 aa24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 KIFC2Q96AC6 838 aa24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 KDM3AQ9Y4C1 1321 aa24.35■■□□□ 1.49
PDLIM2-216ENST00000464275 TBX3O15119 743 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 PPP1R2P41236 205 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 PRELPP51888 382 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 FILIP1LQ4L180 1135 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 SAMD7Q7Z3H4 446 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 H7C1D1 291 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 PDE4DQ08499 809 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 TBX2Q13207 712 aaPredicted RBP24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 MCM6Q14566 821 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 HYIQ5T013 277 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 NUDT12Q9BQG2 462 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 GLIS2Q9BZE0 524 aaPredicted RBP24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 HACL1Q9UJ83 578 aa24.34■■□□□ 1.49
PDLIM2-216ENST00000464275 CIITAP33076 1130 aa24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 TBC1D10BQ4KMP7 808 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 SPECC1LQ69YQ0 1117 aa24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 CCDC174Q6PII3 467 aa24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 CCAR2Q8N163 923 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 DHTKD1Q96HY7 919 aaPredicted RBP24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 FEZ1Q99689 392 aa24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 NT5C3AQ9H0P0 336 aa24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 LIMA1Q9UHB6 759 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms