RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 TMX1Q9H3N1 280 aa8.15□□□□□ -1.1
SSR3-203ENST00000464138 CHST7Q9NS84 486 aa8.15□□□□□ -1.1
SSR3-203ENST00000464138 GPATCH2Q9NW75 528 aa8.15□□□□□ -1.1
SSR3-203ENST00000464138 KIF1BO60333 1816 aa8.15□□□□□ -1.11
SSR3-203ENST00000464138 HFM1A2PYH4 1435 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 NUP155O75694 1391 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 ESYT3A0FGR9 886 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 MSTNO14793 375 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 OXCT1P55809 520 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 PPP2R2AP63151 447 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 SQSTM1Q13501 440 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 SNW1Q13573 536 aaKnown RBP8.14□□□□□ -1.11
SSR3-203ENST00000464138 DEFB132Q7Z7B7 95 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 BRF1Q92994 677 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 CDC6Q99741 560 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
SSR3-203ENST00000464138 NOL6Q9H6R4 1146 aaKnown RBP8.14□□□□□ -1.11
SSR3-203ENST00000464138 GFOD1Q9NXC2 390 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 CGGBP1Q9UFW8 167 aaPredicted RBP8.14□□□□□ -1.11
SSR3-203ENST00000464138 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
SSR3-203ENST00000464138 NWD2Q9ULI1 1742 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 PRR33A8MZF0 331 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 FAM153BP0C7A2 387 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 NCLP19338 710 aaKnown RBP8.13□□□□□ -1.11
SSR3-203ENST00000464138 CLCN7P51798 805 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 FAM50AQ14320 339 aaKnown RBP8.13□□□□□ -1.11
SSR3-203ENST00000464138 TCEA2Q15560 299 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 NKAPLQ5M9Q1 402 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 TMC3Q7Z5M5 1100 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 TRIM59Q8IWR1 403 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 SHISA5Q8N114 240 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 ZNF655Q8N720 491 aaPredicted RBP8.13□□□□□ -1.11
SSR3-203ENST00000464138 DAGLBQ8NCG7 672 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 ADCY4Q8NFM4 1077 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 MRGPRX3Q96LB0 322 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 KANSL2Q9H9L4 492 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 ARHGEF4Q9NR80 690 aa8.13□□□□□ -1.11
SSR3-203ENST00000464138 PRAMEF1O95521 474 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 GSNP06396 782 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 CEACAM5P06731 702 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 FGFR1P11362 822 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 VPS72Q15906 364 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 CWF19L1Q69YN2 538 aaKnown RBP8.12□□□□□ -1.11
SSR3-203ENST00000464138 THAP5Q7Z6K1 395 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 SCUBE1Q8IWY4 988 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 FEZ1Q99689 392 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 SPOCK3Q9BQ16 436 aa8.12□□□□□ -1.11
SSR3-203ENST00000464138 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 CYP26A1O43174 497 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 IGHA1P01876 353 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 PROCP04070 461 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 SRFP11831 508 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 ITIH2P19823 946 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 AMPD2Q01433 879 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 POU4F1Q01851 419 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 IFI16Q16666 785 aaKnown RBP8.11□□□□□ -1.11
SSR3-203ENST00000464138 RSPO4Q2I0M5 234 aaPredicted RBP8.11□□□□□ -1.11
SSR3-203ENST00000464138 KRT27Q7Z3Y8 459 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 HDAC8Q9BY41 377 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 LRRC4CQ9HCJ2 640 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 PIM2Q9P1W9 311 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 SNX11Q9Y5W9 270 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 ST14Q9Y5Y6 855 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 RGPD1P0DJD0 1748 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 CLTCL1P53675 1640 aa8.11□□□□□ -1.11
SSR3-203ENST00000464138 SPATA31A3Q5VYP0 1347 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 RPGRIP1LQ68CZ1 1315 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 TMEM265A0A087WTH1 108 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 KCNH1O95259 989 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 CAPNS1P04632 268 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 HOXC12P31275 282 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 NOP2P46087 812 aaKnown RBP8.1□□□□□ -1.11
SSR3-203ENST00000464138 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 NKPD1Q17RQ9 610 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
SSR3-203ENST00000464138 ZDHHC13Q8IUH4 622 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 FAM181AQ8N9Y4 354 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 ZDHHC15Q96MV8 337 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 DHRS4Q9BTZ2 278 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 DUSP15Q9H1R2 295 aaPredicted RBP8.1□□□□□ -1.11
SSR3-203ENST00000464138 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 PLCH1Q4KWH8 1693 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
SSR3-203ENST00000464138 DNAJC25-GNG10A0A024R161 153 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 TRBV23-1A0A0A0MS06 115 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 SHISA3A0PJX4 238 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 ANKRD62A6NC57 917 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 DYRK3O43781 588 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 FOSL1P15407 271 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 SUMO1P63165 101 aaKnown RBP8.09□□□□□ -1.11
SSR3-203ENST00000464138 CDKAL1Q5VV42 579 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 GTF2IRD2BQ6EKJ0 949 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 NSMFQ6X4W1 530 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 GTF2IRD2Q86UP8 949 aa8.09□□□□□ -1.11
SSR3-203ENST00000464138 TSPYL5Q86VY4 417 aaPredicted RBP8.09□□□□□ -1.11
SSR3-203ENST00000464138 NKX2-4Q9H2Z4 354 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms