RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TMEM67Q5HYA8 995 aa4.98□□□□□ -1.61
SCFD1-204ENST00000463622 MPZL3Q6UWV2 235 aa4.98□□□□□ -1.61
SCFD1-204ENST00000463622 NSD2O96028 1365 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 ANKRD36BQ8N2N9 1353 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 SLC22A31A6NKX4 558 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 BTBD11A6QL63 1104 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 GLI1P08151 1106 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 SRFP11831 508 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 POLR2BP30876 1174 aaKnown RBP4.97□□□□□ -1.61
SCFD1-204ENST00000463622 GBP1P32455 592 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 CWF19L2Q2TBE0 894 aaKnown RBP4.97□□□□□ -1.61
SCFD1-204ENST00000463622 GAB4Q2WGN9 574 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 SEZ6Q53EL9 994 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 TMPRSS7Q7RTY8 843 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 TSPYL5Q86VY4 417 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-204ENST00000463622 KSR1Q8IVT5 923 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 RNF141Q8WVD5 230 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 DIRC2Q96SL1 478 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 TRIT1Q9H3H1 467 aaKnown RBP4.97□□□□□ -1.61
SCFD1-204ENST00000463622 GPATCH2Q9NW75 528 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 TMEM59LQ9UK28 342 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 CCNL1Q9UK58 526 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-204ENST00000463622 KCNH3Q9ULD8 1083 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 SUPT16HQ9Y5B9 1047 aaKnown RBP4.97□□□□□ -1.61
SCFD1-204ENST00000463622 PCDHA11Q9Y5I1 949 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 COL24A1Q17RW2 1714 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 QRICH2Q9H0J4 1663 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 JAG1P78504 1218 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 LDLRAD1Q5T700 205 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 GK5Q6ZS86 529 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 HS2ST1Q7LGA3 356 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 TMEM87AQ8NBN3 555 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 GPR62Q9BZJ7 368 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 ANTXR1Q9H6X2 564 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 ABCC6O95255 1503 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 TOPAZ1Q8N9V7 1692 aa4.97□□□□□ -1.61
SCFD1-204ENST00000463622 UBOX5O94941 541 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 ZNF16P17020 682 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-204ENST00000463622 MCM4P33991 863 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 CLCQ05315 142 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 FSTL1Q12841 308 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 TMCO4Q5TGY1 634 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 ABHD4Q8TB40 342 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 IP6K1Q92551 441 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 ITSN1Q15811 1721 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 KIF7Q2M1P5 1343 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 EVC2Q86UK5 1308 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 IGSF1Q8N6C5 1336 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 NFAT5O94916 1531 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 NHSQ6T4R5 1651 aa4.96□□□□□ -1.62
SCFD1-204ENST00000463622 RAG1P15918 1043 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 AMIGO3Q86WK7 504 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 ZCRB1Q8TBF4 217 aaKnown RBP4.95□□□□□ -1.62
SCFD1-204ENST00000463622 MYLIPQ8WY64 445 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 SYTL4Q96C24 671 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-204ENST00000463622 VWCEQ96DN2 955 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 ZNF512BQ96KM6 892 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-204ENST00000463622 NMRK2Q9NPI5 230 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 KCNQ5Q9NR82 932 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 RGS13O14921 159 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 CHMP4BP1P59074 171 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 HTRA3P83110 453 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 SNW1Q13573 536 aaKnown RBP4.95□□□□□ -1.62
SCFD1-204ENST00000463622 CLEC16AQ2KHT3 1053 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 OVOS1Q6IE37 1185 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 NME9Q86XW9 330 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 FAM84AQ96KN4 292 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 SLC38A3Q99624 504 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 NSUN3Q9H649 340 aaKnown RBP4.95□□□□□ -1.62
SCFD1-204ENST00000463622 FAM53CQ9NYF3 392 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 EBF1Q9UH73 591 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 MINPP1Q9UNW1 487 aa4.95□□□□□ -1.62
SCFD1-204ENST00000463622 FAM86C2PA6NEL3 165 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 ZGLP1P0C6A0 271 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 RAC2P15153 192 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 GALK1P51570 392 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 TGFB2P61812 414 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 APOBRQ0VD83 1088 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 PKN1Q16512 942 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 TIGD5Q53EQ6 642 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 LRRC3Q9BY71 257 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 BACH2Q9BYV9 841 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 KTN1Q86UP2 1357 aaKnown RBP4.94□□□□□ -1.62
SCFD1-204ENST00000463622 SBNO2Q9Y2G9 1366 aa4.94□□□□□ -1.62
SCFD1-204ENST00000463622 SYDE1Q6ZW31 735 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-204ENST00000463622 TMC3Q7Z5M5 1100 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.93□□□□□ -1.622e-7■■■■□ 19.6
SCFD1-204ENST00000463622 ATG4CQ96DT6 458 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 CCDC120Q96HB5 630 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 EAF1Q96JC9 268 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-204ENST00000463622 ASPNQ9BXN1 380 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 RNF32Q9H0A6 362 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 SP110Q9HB58 689 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 GMIPQ9P107 970 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 ARID1BQ8NFD5 2236 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-204ENST00000463622 RBM47A0AV96 593 aaKnown RBP4.93□□□□□ -1.62
SCFD1-204ENST00000463622 ATE1O95260 518 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 HPXP02790 462 aa4.93□□□□□ -1.62
SCFD1-204ENST00000463622 NMIQ13287 307 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms