RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ARHGAP4P98171 946 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 PAK1Q13153 545 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 MCM6Q14566 821 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 TMEM266Q2M3C6 531 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 ADSSL1Q8N142 457 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 SNX29Q8TEQ0 813 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 CALML4Q96GE6 196 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 CUEDC2Q9H467 287 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 KCNMB3Q9NPA1 279 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 RWDD2AQ9UIY3 292 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 MMP14P50281 582 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 PDIA5Q14554 519 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 KCNB1Q14721 858 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 NR1I3Q14994 352 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 GLT8D2Q9H1C3 349 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 ZNF541Q9H0D2 1346 aa14.4□□□□□ -0.1
VAPB-203ENST00000463370 A0A1B0GTH6 734 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 MYMKA6NI61 221 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 FAM86B1E9PN63 330 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 FZD9O00144 591 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 FAM86B2P0C5J1 330 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 FCER1AP12319 257 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 GCFC2P16383 781 aaKnown RBP14.39□□□□□ -0.11
VAPB-203ENST00000463370 SFPQP23246 707 aaKnown RBP eCLIP14.39□□□□□ -0.11
VAPB-203ENST00000463370 STAT3P40763 770 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 USP11P51784 963 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 STK4Q13043 487 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 AP3B2Q13367 1082 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
VAPB-203ENST00000463370 CYP2W1Q8TAV3 490 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 LENG9Q96B70 501 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 C7orf25Q9BPX7 421 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 CNOT7Q9UIV1 285 aaKnown RBP14.39□□□□□ -0.11
VAPB-203ENST00000463370 PCDHA12Q9UN75 941 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 CYP3A7-CYP3A51PA0A087WV96 503 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 MYL1P05976 194 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 CYP3A7P24462 503 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 ASIC1P78348 528 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 PRR16Q569H4 304 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 CCDC150Q8NCX0 1101 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 C16orf45Q96MC5 204 aaPredicted RBP14.39□□□□□ -0.11
VAPB-203ENST00000463370 MBOAT7Q96N66 472 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 ZNF341Q9BYN7 854 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 MAGEF1Q9HAY2 307 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 HACL1Q9UJ83 578 aa14.39□□□□□ -0.11
VAPB-203ENST00000463370 MARCH6O60337 910 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 ASNSP08243 561 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 RPS12P25398 132 aaKnown RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 TBX2Q13207 712 aaPredicted RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 TMEM119Q4V9L6 283 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 KRT79Q5XKE5 535 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 ETNPPLQ8TBG4 499 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 RANBP17Q9H2T7 1088 aaKnown RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 TRMT1Q9NXH9 659 aaKnown RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 FZD1Q9UP38 647 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 SPDYE3A6NKU9 549 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 INPP5BP32019 993 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 SREBF1P36956 1147 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 PDE4DQ08499 809 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 PRAMEF18Q5VWM3 479 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 DYMQ7RTS9 669 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 IRF2BP1Q8IU81 584 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 RAD54LQ92698 747 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 EEF2KMTQ96G04 330 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 CDK5RAP3Q96JB5 506 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 RAB34Q9BZG1 259 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.38□□□□□ -0.11
VAPB-203ENST00000463370 MYH7BA7E2Y1 1941 aa14.38□□□□□ -0.11
VAPB-203ENST00000463370 LTBP3Q9NS15 1303 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 CCT6AP40227 531 aaKnown RBP14.37□□□□□ -0.11
VAPB-203ENST00000463370 KRT31Q15323 416 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 TPD52L1Q16890 204 aaPredicted RBP14.37□□□□□ -0.11
VAPB-203ENST00000463370 NBPF12Q5TAG4 269 aaPredicted RBP14.37□□□□□ -0.11
VAPB-203ENST00000463370 E4F1Q66K89 784 aaPredicted RBP14.37□□□□□ -0.11
VAPB-203ENST00000463370 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 SV2BQ7L1I2 683 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 DEFB129Q9H1M3 183 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 CFBP00751 764 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 SPIRE1Q08AE8 756 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 KIAA0895Q8NCT3 520 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 EXOC1Q9NV70 894 aa14.37□□□□□ -0.11
VAPB-203ENST00000463370 ADKP55263 362 aaKnown RBP14.36□□□□□ -0.11
VAPB-203ENST00000463370 UBXN2AP68543 259 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 CREBRFQ8IUR6 639 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 ZFP91Q96JP5 570 aaPredicted RBP14.36□□□□□ -0.11
VAPB-203ENST00000463370 FEZ1Q99689 392 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 POTEB3A0JP26 581 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 POTECB2RU33 542 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 PIK3CDO00329 1044 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 PBX1P40424 430 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 TNFAIP1Q13829 316 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 KIF4BQ2VIQ3 1234 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 POTEBQ6S5H4 581 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 TMEM139Q8IV31 216 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms