RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 DUSP23Q9BVJ7 150 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 EMC7Q9NPA0 242 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 C1GALT1Q9NS00 363 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 USP21Q9UK80 565 aa4.99□□□□□ -1.61
GPNMB-205ENST00000463011 FAM95CA0A1B0GW59 222 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 PTPDC1A2A3K4 754 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 ULK1O75385 1050 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 SNUPNO95149 360 aaKnown RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 BMP3P12645 472 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 MAP4P27816 1152 aaKnown RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 GRIK1P39086 918 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 KPNA1P52294 538 aaPredicted RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 ERVK-21P61565 698 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 NFKBIBQ15653 356 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 PRRT3Q5FWE3 981 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 LCE2CQ5TA81 110 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 OVCH1Q7RTY7 1134 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 CHST14Q8NCH0 376 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 RCBTB1Q8NDN9 531 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 AHCYL2Q96HN2 611 aaKnown RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 HDAC8Q9BY41 377 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 CELF4Q9BZC1 486 aaKnown RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 IPPKQ9H8X2 491 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 PRDM5Q9NQX1 630 aaPredicted RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 H2AFY2Q9P0M6 372 aaPredicted RBP4.98□□□□□ -1.61
GPNMB-205ENST00000463011 COMMD10Q9Y6G5 202 aa4.98□□□□□ -1.61
GPNMB-205ENST00000463011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.97□□□□□ -1.61
GPNMB-205ENST00000463011 CCDC66A2RUB6 948 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 VSTM5A8MXK1 200 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 PRR33A8MZF0 331 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 K7ESF4 209 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 GNB5O14775 395 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 SOD2P04179 222 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 GSTM1P09488 218 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FAM87AP0C7U9 286 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 VAV1P15498 845 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 IREB2P48200 963 aaKnown RBP4.97□□□□□ -1.61
GPNMB-205ENST00000463011 ST5P78524 1137 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 OCRLQ01968 901 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 TNK2Q07912 1038 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FAPQ12884 760 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 BRD3Q15059 726 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 TESK1Q15569 626 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 INF2Q27J81 1249 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 INAVAQ3KP66 663 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FAM47CQ5HY64 1035 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 E4F1Q66K89 784 aaPredicted RBP4.97□□□□□ -1.61
GPNMB-205ENST00000463011 PGM2L1Q6PCE3 622 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FAM214BQ7L5A3 538 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 KSR1Q8IVT5 923 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 C2orf69Q8N8R5 385 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 DAGLBQ8NCG7 672 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 CLRN3Q8NCR9 226 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 GIMAP7Q8NHV1 300 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 ENOX1Q8TC92 643 aaKnown RBP4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FBXW5Q969U6 566 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 TCTN2Q96GX1 697 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 SLC39A13Q96H72 371 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FAM46AQ96IP4 442 aaKnown RBP4.97□□□□□ -1.61
GPNMB-205ENST00000463011 COX4I2Q96KJ9 171 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 SLC12A9Q9BXP2 914 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 ENAMQ9NRM1 1142 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 OBP2AQ9NY56 170 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 PPARGC1AQ9UBK2 798 aaKnown RBP4.97□□□□□ -1.61
GPNMB-205ENST00000463011 PCDHA2Q9Y5H9 948 aa4.97□□□□□ -1.61
GPNMB-205ENST00000463011 FZD9O00144 591 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 LDHAP00338 332 aaKnown RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 PF4V1P10720 104 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 PAMP19021 973 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 NOS3P29474 1203 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 BMP8BP34820 402 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 KIR3DL1P43629 444 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 MECP2P51608 486 aaKnown RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 KCNAB2Q13303 367 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 KLF1Q13351 362 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 KIZQ2M2Z5 673 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 ZNF385CQ66K41 422 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 IQCEQ6IPM2 695 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 CXorf57Q6NSI4 855 aaKnown RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 Q6ZS46 218 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 PNMA8AQ86V59 439 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 DGKHQ86XP1 1220 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 CISD2Q8N5K1 135 aaKnown RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 ZNF655Q8N720 491 aaPredicted RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 WFDC12Q8WWY7 111 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 SLC5A5Q92911 643 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 FAXDC2Q96IV6 333 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 CHAMP1Q96JM3 812 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 HEXIM2Q96MH2 286 aaKnown RBP4.96□□□□□ -1.62
GPNMB-205ENST00000463011 KCNF1Q9H3M0 494 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 CATSPERZQ9NTU4 200 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 GPATCH2Q9NW75 528 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 OXSMQ9NWU1 459 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 ZBTB21Q9ULJ3 1066 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 ANKRD6Q9Y2G4 727 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 WASHC2AQ641Q2 1341 aa4.96□□□□□ -1.62
GPNMB-205ENST00000463011 NPHP3-ACAD11A0A0J9YXS1 232 aa4.95□□□□□ -1.62
GPNMB-205ENST00000463011 GSTA4O15217 222 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms