RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ASB14A6NK59 587 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 ZBED4O75132 1171 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 IQCF3P0C7M6 154 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 GPNMBQ14956 572 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 UBE3CQ15386 1083 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 LEXMQ3ZCV2 418 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 SBK1Q52WX2 424 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 DEFB128Q7Z7B8 93 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 FBXO16Q8IX29 292 aaPredicted RBP9.24□□□□□ -0.93
SMC3-202ENST00000462899 RPAP2Q8IXW5 612 aaPredicted RBP9.24□□□□□ -0.93
SMC3-202ENST00000462899 GMCL1P1Q8NEA9 526 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.24□□□□□ -0.93
SMC3-202ENST00000462899 RHPN1Q8TCX5 695 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 GDPD5Q8WTR4 605 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 FRAT1Q92837 279 aaPredicted RBP9.24□□□□□ -0.93
SMC3-202ENST00000462899 CTAGE1Q96RT6 745 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 KCNH6Q9H252 994 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 UBE2ZQ9H832 354 aaPredicted RBP9.24□□□□□ -0.93
SMC3-202ENST00000462899 ACAD9Q9H845 621 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 IL1RAPL2Q9NP60 686 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 ARPP21Q9UBL0 812 aaPredicted RBP9.24□□□□□ -0.93
SMC3-202ENST00000462899 FEM1BQ9UK73 627 aa9.24□□□□□ -0.93
SMC3-202ENST00000462899 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
SMC3-202ENST00000462899 DYNC1LI2O43237 492 aaPredicted RBP9.23□□□□□ -0.93
SMC3-202ENST00000462899 ZEB2O60315 1214 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 SUPT20HL2P0C7V6 817 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 FDX1P10109 184 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 TSR1Q2NL82 804 aaKnown RBP9.23□□□□□ -0.93
SMC3-202ENST00000462899 DUSP28Q4G0W2 176 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 ZKSCAN2Q63HK3 967 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 IQSEC1Q6DN90 963 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 GJD3Q8N144 294 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 KIFC2Q96AC6 838 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 DNAJC2Q99543 621 aaKnown RBP9.23□□□□□ -0.93
SMC3-202ENST00000462899 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
SMC3-202ENST00000462899 AP5M1Q9H0R1 490 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 PAG1Q9NWQ8 432 aa9.23□□□□□ -0.93
SMC3-202ENST00000462899 WDR87Q6ZQQ6 2873 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 GSG1L2A8MUP6 293 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 MAP3K7O43318 606 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 RAD21O60216 631 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 ACTN1P12814 892 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 IL9P15248 144 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 WDR5P61964 334 aaKnown RBP9.22□□□□□ -0.93
SMC3-202ENST00000462899 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 NFRKBQ6P4R8 1299 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 NEK9Q8TD19 979 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 CEP95Q96GE4 821 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 FBXL18Q96ME1 805 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 EPAS1Q99814 870 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 HAUS7Q99871 368 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 SUGCTQ9HAC7 445 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 EPB41L4AQ9HCS5 686 aaPredicted RBP9.22□□□□□ -0.93
SMC3-202ENST00000462899 HOMER2Q9NSB8 354 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 MTMR4Q9NYA4 1195 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 SLC4A4Q9Y6R1 1079 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 DNAH14Q0VDD8 3507 aa9.22□□□□□ -0.93
SMC3-202ENST00000462899 MYH7BA7E2Y1 1941 aa9.21□□□□□ -0.93
SMC3-202ENST00000462899 PLA2G6O60733 806 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 CXCL10P02778 98 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 ATP5JP18859 108 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 ERVK-21P61565 698 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 DEFB103AP81534 67 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 RBL2Q08999 1139 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 TCTN1Q2MV58 587 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 TKFCQ3LXA3 575 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 MUM1L1Q5H9M0 696 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 GIMAP6Q6P9H5 292 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 NOL8Q76FK4 1167 aaKnown RBP9.21□□□□□ -0.94
SMC3-202ENST00000462899 TMCO2Q7Z6W1 182 aaPredicted RBP9.21□□□□□ -0.94
SMC3-202ENST00000462899 AMOTL1Q8IY63 956 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 PURBQ96QR8 312 aaKnown RBP9.21□□□□□ -0.94
SMC3-202ENST00000462899 STRBPQ96SI9 672 aaKnown RBP9.21□□□□□ -0.94
SMC3-202ENST00000462899 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 CLIP2Q9UDT6 1046 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 COG6Q9Y2V7 657 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 PLXNA3P51805 1871 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 CACNA1AO00555 2505 aa9.21□□□□□ -0.94
SMC3-202ENST00000462899 LOC102724159A0A0B4J2E5 919 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 LINC01553A4QN01 128 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 KIF28PB7ZC32 967 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 ARHGAP33O14559 1287 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 GJB5O95377 273 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 TTLL1O95922 423 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 BMP3P12645 472 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 ALADP13716 330 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 STAT2P52630 851 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 PTPN11Q06124 597 aaPredicted RBP9.2□□□□□ -0.94
SMC3-202ENST00000462899 PWP2Q15269 919 aaKnown RBP9.2□□□□□ -0.94
SMC3-202ENST00000462899 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
SMC3-202ENST00000462899 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 EEPD1Q7L9B9 569 aa9.2□□□□□ -0.94
SMC3-202ENST00000462899 LRRC47Q8N1G4 583 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms