RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 ALAS1P13196 640 aa10.68□□□□□ -0.7
SRRM1-205ENST00000462710 GPNMBQ14956 572 aa10.68□□□□□ -0.7
SRRM1-205ENST00000462710 PPP2R5BQ15173 497 aa10.68□□□□□ -0.7
SRRM1-205ENST00000462710 NOL8Q76FK4 1167 aaKnown RBP10.68□□□□□ -0.7
SRRM1-205ENST00000462710 MRPL38Q96DV4 380 aaKnown RBP10.68□□□□□ -0.7
SRRM1-205ENST00000462710 TTC14Q96N46 770 aa10.68□□□□□ -0.7
SRRM1-205ENST00000462710 UPF3BQ9BZI7 483 aaKnown RBP10.68□□□□□ -0.7
SRRM1-205ENST00000462710 TRMT13Q9NUP7 481 aaKnown RBP10.68□□□□□ -0.7
SRRM1-205ENST00000462710 MICAL3Q7RTP6 2002 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 MYL3P08590 195 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 SNHG28P0DPA3 235 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 TDO2P48775 406 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 PPARAQ07869 468 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 ZMYM1Q5SVZ6 1142 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 SYDE2Q5VT97 1194 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 LRRC8DQ7L1W4 858 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 HOXC8P31273 242 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 TFAP4Q01664 338 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 TRAF7Q6Q0C0 670 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 SAMD1Q6SPF0 538 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-205ENST00000462710 GJD3Q8N144 294 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-205ENST00000462710 CTAGE1Q96RT6 745 aa10.67□□□□□ -0.7
SRRM1-205ENST00000462710 LAMA4Q16363 1823 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 GH1P01241 217 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 TOP1P11387 765 aaKnown RBP10.66□□□□□ -0.7
SRRM1-205ENST00000462710 CYP2C9P11712 490 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 BAATQ14032 418 aaPredicted RBP10.66□□□□□ -0.7
SRRM1-205ENST00000462710 KCNV1Q6PIU1 500 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 ARNTL2Q8WYA1 636 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 PABPC5Q96DU9 382 aaKnown RBP10.66□□□□□ -0.7
SRRM1-205ENST00000462710 IRF2BPLQ9H1B7 796 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 GTF2IRD1Q9UHL9 959 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 RWDD3Q9Y3V2 267 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 INSL6Q9Y581 213 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 NLRC5Q86WI3 1866 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 LINC01553A4QN01 128 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 MINDY4BA8MYZ0 360 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 C5orf67F2Z3F1 127 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 RB1P06400 928 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 PDE4DQ08499 809 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
SRRM1-205ENST00000462710 ABCB11O95342 1321 aa10.66□□□□□ -0.7
SRRM1-205ENST00000462710 COL6A3P12111 3177 aa10.65□□□□□ -0.7
SRRM1-205ENST00000462710 DCXO43602 365 aa10.65□□□□□ -0.7
SRRM1-205ENST00000462710 IKBKEQ14164 716 aa10.65□□□□□ -0.7
SRRM1-205ENST00000462710 DHX38Q92620 1227 aaKnown RBP10.65□□□□□ -0.7
SRRM1-205ENST00000462710 FTOQ9C0B1 505 aaKnown RBP eCLIP10.65□□□□□ -0.7
SRRM1-205ENST00000462710 M0R2C6 588 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 MMP3P08254 477 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 PTGISQ16647 500 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 ADHFE1Q8IWW8 467 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 ANKS1AQ92625 1134 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 MFSD14AQ96MC6 490 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 POP1Q99575 1024 aaKnown RBP10.65□□□□□ -0.71
SRRM1-205ENST00000462710 DCTPP1Q9H773 170 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 SUGCTQ9HAC7 445 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 IL17RBQ9NRM6 502 aa10.65□□□□□ -0.71
SRRM1-205ENST00000462710 H3BNC9 293 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 RFXAPO00287 272 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 RAD21O60216 631 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 LGR5O75473 907 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 AMHP03971 560 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 CASTP20810 708 aaKnown RBP10.64□□□□□ -0.71
SRRM1-205ENST00000462710 ARHGAP1Q07960 439 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 HERC4Q5GLZ8 1057 aaPredicted RBP10.64□□□□□ -0.71
SRRM1-205ENST00000462710 FAM26DQ5JW98 314 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 RNF207Q6ZRF8 634 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 DEFB128Q7Z7B8 93 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 APBB2Q92870 758 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 NAPBQ9H115 298 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 F2P00734 622 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 LAMC2Q13753 1193 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 NAALADL2Q58DX5 795 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 GPATCH4Q5T3I0 446 aaKnown RBP10.64□□□□□ -0.71
SRRM1-205ENST00000462710 RPAINQ86UA6 219 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 FBXO22Q8NEZ5 403 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 KAT2BQ92831 832 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 ATG2AQ2TAZ0 1938 aa10.64□□□□□ -0.71
SRRM1-205ENST00000462710 CKBP12277 381 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 MCCP23508 829 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 MRE11P49959 708 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 NHLH1Q02575 133 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 MCF2L2Q86YR7 1114 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 PPTC7Q8NI37 304 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.712e-12■■□□□ 13.6
SRRM1-205ENST00000462710 HOMER2Q9NSB8 354 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 FSD2A1L4K1 749 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 NBNO60934 754 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 PSEN2P49810 448 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 ZP2Q05996 745 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 DGKDQ16760 1214 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
SRRM1-205ENST00000462710 GDF6Q6KF10 455 aaPredicted RBP10.63□□□□□ -0.71
SRRM1-205ENST00000462710 NSMFQ6X4W1 530 aa10.63□□□□□ -0.71
SRRM1-205ENST00000462710 NSUN3Q9H649 340 aaKnown RBP10.63□□□□□ -0.71
SRRM1-205ENST00000462710 CD320Q9NPF0 282 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms