RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 DCP1AQ9NPI6 582 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 RYDENQ9NUL5 291 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 AGPAT5Q9NUQ2 364 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MCM9Q9NXL9 1143 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 BARHL2Q9NY43 387 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 STIM2Q9P246 746 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 SLAIN2Q9P270 581 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 STK17AQ9UEE5 414 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 SEC63Q9UGP8 760 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 MINPP1Q9UNW1 487 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 COL22A1Q8NFW1 1626 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 COL1A1P02452 1464 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 PLCH1Q4KWH8 1693 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 FLT1P17948 1338 aa3.9□□□□□ -1.79
COL8A1-204ENST00000462604 ZC3H4Q9UPT8 1303 aaKnown RBP3.9□□□□□ -1.79
COL8A1-204ENST00000462604 TCHHQ07283 1943 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ROBO3Q96MS0 1386 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CICQ96RK0 1608 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 LAMA4Q16363 1823 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 PVALEFA0A1B0GWK0 134 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SSU72P8A0A1W2PR75 194 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 RCCD1A6NED2 376 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 GOLGA6L10A6NI86 522 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 RASSF10A6NK89 507 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC53A6NM62 1247 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SMIM22K7EJ46 135 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 M0R2N6 131 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 AGPSO00116 658 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 PDE2AO00408 941 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 NDUFAB1O14561 156 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 PJA2O43164 708 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CCNT1O60563 726 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ERLIN2O94905 339 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 HEXIM1O94992 359 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 LCA5LO95447 670 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 BAG3O95817 575 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 GNA14O95837 355 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SERPING1P05155 500 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TSPY3P0CV98 308 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TSPY8P0CW00 308 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 MYBL2P10244 700 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 HIBADHP31937 336 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 INPP5BP32019 993 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ATP6V1AP38606 617 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 EPS15P42566 896 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 MATR3P43243 847 aaKnown RBP eCLIP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 IRAK1P51617 712 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ADCY7P51828 1080 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TNNC1P63316 161 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SKOR1P84550 965 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 PSMD2Q13200 908 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SEPT2Q15019 361 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SF3B3Q15393 1217 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CALCRLQ16602 461 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TXNRD1Q16881 649 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 LETM2Q2VYF4 491 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ERFEQ4G0M1 354 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SLC9C1Q4G0N8 1177 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC40Q4G0X9 1142 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TDRD12Q587J7 1177 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SFMBT2Q5VUG0 894 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 MCTP2Q6DN12 878 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CENPPQ6IPU0 288 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 RCSD1Q6JBY9 416 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 NFRKBQ6P4R8 1299 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 FOXR2Q6PJQ5 311 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CLEC4GQ6UXB4 293 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 LRIG3Q6UXM1 1119 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 KDM7AQ6ZMT4 941 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 MMS22LQ6ZRQ5 1243 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 UNC13DQ70J99 1090 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 RRAGAQ7L523 313 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 FBXO33Q7Z6M2 555 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 NEK8Q86SG6 692 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 PACS2Q86VP3 889 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC125Q86Z20 511 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CERS3Q8IU89 383 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CREG2Q8IUH2 290 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SUGP1Q8IWZ8 645 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CD302Q8IX05 232 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF444Q8N0Y2 327 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 GUF1Q8N442 669 aaKnown RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 BCAS4Q8TDM0 211 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 WHAMMQ8TF30 809 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 RIN2Q8WYP3 895 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SYN2Q92777 582 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 FAM84BQ96KN1 310 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TANGO6Q9C0B7 1094 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 NYXQ9GZU5 481 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 PLEKHA4Q9H4M7 779 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 YY1AP1Q9H869 796 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SLC39A2Q9NP94 309 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 RIC8AQ9NPQ8 531 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 FAM207AQ9NSI2 230 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 BTG4Q9NY30 223 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CEP72Q9P209 647 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 MAD2L2Q9UI95 211 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SERPINA10Q9UK55 444 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 TFR2Q9UP52 801 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms