RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 SLC16A2P36021 539 aa20.83■□□□□ 0.93
RER1-206ENST00000462129 CCDC174Q6PII3 467 aa20.83■□□□□ 0.93
RER1-206ENST00000462129 GLT1D1Q96MS3 346 aa20.83■□□□□ 0.93
RER1-206ENST00000462129 PBX4Q9BYU1 374 aa20.83■□□□□ 0.93
RER1-206ENST00000462129 MAD2L2Q9UI95 211 aa20.83■□□□□ 0.93
RER1-206ENST00000462129 PALM3A6NDB9 673 aaPredicted RBP20.82■□□□□ 0.92
RER1-206ENST00000462129 SNAI1O95863 264 aaPredicted RBP20.82■□□□□ 0.92
RER1-206ENST00000462129 IRX5P78411 483 aaPredicted RBP20.82■□□□□ 0.92
RER1-206ENST00000462129 STK3Q13188 491 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 TMEM240Q5SV17 173 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 SNRNP48Q6IEG0 339 aaKnown RBP20.82■□□□□ 0.92
RER1-206ENST00000462129 BTNL9Q6UXG8 535 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 MSL3Q8N5Y2 521 aaKnown RBP20.82■□□□□ 0.92
RER1-206ENST00000462129 DDX11Q96FC9 970 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 TEX13BQ9BXU2 312 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 PRDM12Q9H4Q4 367 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 PNMA2Q9UL42 364 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 LIMCH1Q9UPQ0 1083 aa20.82■□□□□ 0.92
RER1-206ENST00000462129 C6orf222P0C671 652 aaPredicted RBP20.81■□□□□ 0.92
RER1-206ENST00000462129 PDIA3P30101 505 aaKnown RBP20.81■□□□□ 0.92
RER1-206ENST00000462129 EVCP57679 992 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 CCSAPQ6IQ19 270 aaPredicted RBP20.81■□□□□ 0.92
RER1-206ENST00000462129 TTBK2Q6IQ55 1244 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 STAG2Q8N3U4 1231 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 VTI1AQ96AJ9 217 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 ZSCAN31Q96LW9 406 aaPredicted RBP20.81■□□□□ 0.92
RER1-206ENST00000462129 LARP6Q9BRS8 491 aaKnown RBP20.81■□□□□ 0.92
RER1-206ENST00000462129 PPP1R12CQ9BZL4 782 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 THEGQ9P2T0 379 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 SEC63Q9UGP8 760 aaKnown RBP20.81■□□□□ 0.92
RER1-206ENST00000462129 PRR12Q9ULL5 1215 aa20.81■□□□□ 0.92
RER1-206ENST00000462129 ELP1O95163 1332 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 DUSP11O75319 330 aaKnown RBP20.8■□□□□ 0.92
RER1-206ENST00000462129 ASGR1P07306 291 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 ACRP10323 421 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 CSF2RAP15509 400 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 SLC4A3P48751 1232 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
RER1-206ENST00000462129 AKAP17AQ02040 695 aaKnown RBP20.8■□□□□ 0.92
RER1-206ENST00000462129 TRAF1Q13077 416 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 C16orf59Q7L2K0 433 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 TMEM199Q8N511 208 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 ATXN2LQ8WWM7 1075 aaKnown RBP20.8■□□□□ 0.92
RER1-206ENST00000462129 VAT1LQ9HCJ6 419 aa20.8■□□□□ 0.92
RER1-206ENST00000462129 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
RER1-206ENST00000462129 A0A0U1RQG5 324 aaPredicted RBP20.79■□□□□ 0.92
RER1-206ENST00000462129 CDKL5O76039 1030 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
RER1-206ENST00000462129 SMARCA1P28370 1054 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 ACVR2BQ13705 512 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 PSRC1Q6PGN9 363 aaPredicted RBP20.79■□□□□ 0.92
RER1-206ENST00000462129 MAMDC4Q6UXC1 1216 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 TMTC3Q6ZXV5 915 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 ADGRF4Q8IZF3 695 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 PCSK9Q8NBP7 692 aaKnown RBP20.79■□□□□ 0.92
RER1-206ENST00000462129 RRP36Q96EU6 259 aaKnown RBP20.79■□□□□ 0.92
RER1-206ENST00000462129 SPC25Q9HBM1 224 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.79■□□□□ 0.92
RER1-206ENST00000462129 RAPGEFL1Q9UHV5 662 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 TPCN1Q9ULQ1 816 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 RIPK3Q9Y572 518 aa20.79■□□□□ 0.92
RER1-206ENST00000462129 NID2Q14112 1375 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 DNAJC25-GNG10A0A024R161 153 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 ADCY6O43306 1168 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 CDK7P50613 346 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 OAZ1P54368 228 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 CCDC85BQ15834 202 aaPredicted RBP20.78■□□□□ 0.92
RER1-206ENST00000462129 RASIP1Q5U651 963 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 ZNF365Q70YC5 407 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 HOMER1Q86YM7 354 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 CPXCR1Q8N123 301 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 ADAMTS19Q8TE59 1207 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 ASB2Q96Q27 587 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 SPZ1Q9BXG8 430 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 SLC38A10Q9HBR0 1119 aa20.78■□□□□ 0.92
RER1-206ENST00000462129 ARVCFO00192 962 aa20.77■□□□□ 0.92
RER1-206ENST00000462129 TLR3O15455 904 aaKnown RBP20.77■□□□□ 0.92
RER1-206ENST00000462129 IGFBP4P22692 258 aa20.77■□□□□ 0.92
RER1-206ENST00000462129 CDC37Q16543 378 aaPredicted RBP20.77■□□□□ 0.92
RER1-206ENST00000462129 TRIM22Q8IYM9 498 aa20.77■□□□□ 0.92
RER1-206ENST00000462129 CCDC82Q8N4S0 544 aa20.77■□□□□ 0.92
RER1-206ENST00000462129 RANBP17Q9H2T7 1088 aaKnown RBP20.77■□□□□ 0.92
RER1-206ENST00000462129 MSRAQ9UJ68 235 aa20.77■□□□□ 0.92
RER1-206ENST00000462129 PFKFB2O60825 505 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 PLEKHA8P1O95397 391 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 ADGRE1Q14246 886 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 RAB30Q15771 203 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 CCDC144BQ3MJ40 725 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 GNASQ5JWF2 1037 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 ZNF467Q7Z7K2 595 aaPredicted RBP20.76■□□□□ 0.91
RER1-206ENST00000462129 FAM126BQ8IXS8 530 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 PIBF1Q8WXW3 757 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 UPF3AQ9H1J1 476 aaKnown RBP20.76■□□□□ 0.91
RER1-206ENST00000462129 CPVLQ9H3G5 476 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 RAVER2Q9HCJ3 691 aaKnown RBP20.76■□□□□ 0.91
RER1-206ENST00000462129 CCPG1Q9ULG6 757 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 MYH6P13533 1939 aa20.76■□□□□ 0.91
RER1-206ENST00000462129 ZBTB5O15062 677 aa20.75■□□□□ 0.91
RER1-206ENST00000462129 CDC27P30260 824 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms