RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 EBAG9O00559 213 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 TCP1P17987 556 aaKnown RBP20.48■□□□□ 0.87
HPS3-204ENST00000462030 ERCC3P19447 782 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 LIG3P49916 1009 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 GTF2A1P52655 376 aaPredicted RBP20.48■□□□□ 0.87
HPS3-204ENST00000462030 LETM2Q2VYF4 491 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 ERFEQ4G0M1 354 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 USP17L1Q7RTZ2 530 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 RUBCNQ92622 972 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 CPVLQ9H3G5 476 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 NDST4Q9H3R1 872 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 MMRN2Q9H8L6 949 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 BSDC1Q9NW68 430 aaPredicted RBP20.48■□□□□ 0.87
HPS3-204ENST00000462030 LCA5LO95447 670 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 CELF1Q92879 486 aaKnown RBP20.48■□□□□ 0.87
HPS3-204ENST00000462030 AK8Q96MA6 479 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 ALS2CR12Q96Q35 445 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 RBM12Q9NTZ6 932 aaKnown RBP20.48■□□□□ 0.87
HPS3-204ENST00000462030 TFCP2L1Q9NZI6 479 aa20.48■□□□□ 0.87
HPS3-204ENST00000462030 CCNT1O60563 726 aaKnown RBP20.47■□□□□ 0.87
HPS3-204ENST00000462030 TECP42680 631 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 RRAGAQ7L523 313 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 FBXO33Q7Z6M2 555 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 DGKHQ86XP1 1220 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 MMTAG2Q9BU76 263 aaKnown RBP20.47■□□□□ 0.87
HPS3-204ENST00000462030 OPA1O60313 960 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 GOLGA8HP0CJ92 632 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 CENPPQ6IPU0 288 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 CNNM4Q6P4Q7 775 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 EMBQ6PCB8 327 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 GBP6Q6ZN66 633 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 MTMR8Q96EF0 704 aa20.47■□□□□ 0.87
HPS3-204ENST00000462030 BUB1O43683 1085 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 MAGEA1P43355 309 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 ITPK1Q13572 414 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 C8orf74Q6P047 294 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 KAT2BQ92831 832 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 MS4A14Q96JA4 679 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 TLR10Q9BXR5 811 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 GFPT1Q06210 699 aaPredicted RBP20.46■□□□□ 0.87
HPS3-204ENST00000462030 SH2D3CQ8N5H7 860 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 ZIM3Q96PE6 472 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 RUFY1Q96T51 708 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 FAM107BQ9H098 131 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 SAMM50Q9Y512 469 aa20.46■□□□□ 0.87
HPS3-204ENST00000462030 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 HSF2BPO75031 334 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 EPB41P11171 864 aaKnown RBP20.45■□□□□ 0.86
HPS3-204ENST00000462030 PPP1R2P41236 205 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 GALNT17Q6IS24 598 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 BAP1Q92560 729 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 CAVIN3Q969G5 261 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 IQCDQ96DY2 449 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 ERLIN2O94905 339 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 SLC1A4P43007 532 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 PAFAH1B1P43034 410 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 GNAQP50148 359 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 RASSF7Q02833 373 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 PDCLQ13371 301 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 MAN2A1Q16706 1144 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 KLHDC7AQ5VTJ3 777 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 TMC4Q7Z404 712 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 POLD4Q9HCU8 107 aa20.45■□□□□ 0.86
HPS3-204ENST00000462030 ZSCAN5CA6NGD5 496 aaPredicted RBP20.44■□□□□ 0.86
HPS3-204ENST00000462030 COBLL1Q53SF7 1204 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 ALS2CLQ60I27 953 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 KCTD16Q68DU8 428 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 CCDC155Q8N6L0 562 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 PJA2O43164 708 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 KRT14P02533 472 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 TNFRSF8P28908 595 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 NAPAP54920 295 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 SKOR1P84550 965 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 AMPD3Q01432 767 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 C12orf60Q5U649 245 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 SLC44A5Q8NCS7 719 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 ANKS1AQ92625 1134 aa20.44■□□□□ 0.86
HPS3-204ENST00000462030 CCDC88AQ3V6T2 1871 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 ESYT3A0FGR9 886 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 MYMKA6NI61 221 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 GLI1P08151 1106 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 NONOQ15233 471 aaKnown RBP eCLIP20.43■□□□□ 0.86
HPS3-204ENST00000462030 ASTE1Q2TB18 679 aaPredicted RBP20.43■□□□□ 0.86
HPS3-204ENST00000462030 DYMQ7RTS9 669 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 ZMYND12Q9H0C1 365 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 FAM153BP0C7A2 387 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 CARSP49589 748 aaKnown RBP20.43■□□□□ 0.86
HPS3-204ENST00000462030 ATP1A2P50993 1020 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 SF3B3Q15393 1217 aaKnown RBP20.43■□□□□ 0.86
HPS3-204ENST00000462030 FAM153CQ494X1 144 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 PDXDC1Q6P996 788 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 TMED8Q6PL24 325 aaPredicted RBP20.43■□□□□ 0.86
HPS3-204ENST00000462030 POTEDQ86YR6 584 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 ACSBG1Q96GR2 724 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 MKNK2Q9HBH9 465 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 BLOC1S4Q9NUP1 217 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 FAM153AQ9UHL3 310 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 STX8Q9UNK0 236 aa20.43■□□□□ 0.86
HPS3-204ENST00000462030 MAST2Q6P0Q8 1798 aa20.42■□□□□ 0.86
HPS3-204ENST00000462030 PALM3A6NDB9 673 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms