RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 SAP30BPQ9UHR5 308 aaKnown RBP16.8■□□□□ 0.28
C9orf78-204ENST00000461762 LEMD3Q9Y2U8 911 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 PCDHA13Q9Y5I0 950 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 ABCB11O95342 1321 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 MYMKA6NI61 221 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 EPHB6O15197 1021 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 ZMYND10O75800 440 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 LDHCP07864 332 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 ITIH3Q06033 890 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 USP17L2Q6R6M4 530 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 PNMA5Q96PV4 448 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 EYA3Q99504 573 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
C9orf78-204ENST00000461762 SH2D4AQ9H788 454 aa16.8■□□□□ 0.28
C9orf78-204ENST00000461762 ESYT2A0FGR8 921 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
C9orf78-204ENST00000461762 TNNT3P45378 269 aaPredicted RBP16.79■□□□□ 0.28
C9orf78-204ENST00000461762 NOVP48745 357 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 IQCEQ6IPM2 695 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 LRRC31Q6UY01 552 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 UNC13DQ70J99 1090 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 SRLQ86TD4 932 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 CAGE1Q8TC20 777 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 CCDC88AQ3V6T2 1871 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 AGPSO00116 658 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 MYO1CO00159 1063 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 EDIL3O43854 480 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 FXR2P51116 673 aaKnown RBP eCLIP16.79■□□□□ 0.28
C9orf78-204ENST00000461762 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 BIN2Q9UBW5 565 aaPredicted RBP16.79■□□□□ 0.28
C9orf78-204ENST00000461762 STK17AQ9UEE5 414 aa16.79■□□□□ 0.28
C9orf78-204ENST00000461762 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 TACC1O75410 805 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 FOXR1Q6PIV2 292 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 SLC51AQ86UW1 340 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 GUF1Q8N442 669 aaKnown RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 SMCR8Q8TEV9 937 aaPredicted RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 PIGSQ96S52 555 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 SELENOOQ9BVL4 669 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 IFIH1Q9BYX4 1025 aaKnown RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 CAPN6Q9Y6Q1 641 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 EIF4A3P38919 411 aaKnown RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 TXKP42681 527 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 KIF11P52732 1056 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 MAN2A1Q16706 1144 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 C15orf52Q6ZUT6 534 aaKnown RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 AFAP1L1Q8TED9 768 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 AENQ8WTP8 325 aaKnown RBP16.78■□□□□ 0.28
C9orf78-204ENST00000461762 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
C9orf78-204ENST00000461762 GGCXP38435 758 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 CERS3Q8IU89 383 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 REXO1Q8N1G1 1221 aaKnown RBP16.77■□□□□ 0.28
C9orf78-204ENST00000461762 BAP1Q92560 729 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 RUBCNQ92622 972 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 MLXIPQ9HAP2 919 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 FAM207AQ9NSI2 230 aaPredicted RBP16.77■□□□□ 0.28
C9orf78-204ENST00000461762 TMEM260Q9NX78 707 aa16.77■□□□□ 0.28
C9orf78-204ENST00000461762 SEC63Q9UGP8 760 aaKnown RBP16.77■□□□□ 0.28
C9orf78-204ENST00000461762 RRP15Q9Y3B9 282 aaKnown RBP16.77■□□□□ 0.28
C9orf78-204ENST00000461762 GPR75-ASB3A0A0A6YYF3 556 aa16.77■□□□□ 0.27
C9orf78-204ENST00000461762 PJA2O43164 708 aa16.77■□□□□ 0.27
C9orf78-204ENST00000461762 ZPR1O75312 459 aa16.77■□□□□ 0.27
C9orf78-204ENST00000461762 HOXA7P31268 230 aaPredicted RBP16.77■□□□□ 0.27
C9orf78-204ENST00000461762 EHHADHQ08426 723 aa16.77■□□□□ 0.27
C9orf78-204ENST00000461762 PDIA5Q14554 519 aa16.77■□□□□ 0.27
C9orf78-204ENST00000461762 ASTE1Q2TB18 679 aaPredicted RBP16.77■□□□□ 0.27
C9orf78-204ENST00000461762 FOXR2Q6PJQ5 311 aa16.77■□□□□ 0.27
C9orf78-204ENST00000461762 LARP4BQ92615 738 aaKnown RBP16.77■□□□□ 0.27
C9orf78-204ENST00000461762 MOCS3O95396 460 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 FGFR1OPO95684 399 aaKnown RBP16.76■□□□□ 0.27
C9orf78-204ENST00000461762 LRRC63Q05C16 580 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 CALCRLQ16602 461 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 LRRC55Q6ZSA7 311 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 GSPT2Q8IYD1 628 aaKnown RBP16.76■□□□□ 0.27
C9orf78-204ENST00000461762 RIN2Q8WYP3 895 aaPredicted RBP16.76■□□□□ 0.27
C9orf78-204ENST00000461762 CEP95Q96GE4 821 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 GDAP1L1Q96MZ0 367 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 EDEM3Q9BZQ6 932 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
C9orf78-204ENST00000461762 hCG_1984214I3L0E3 225 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 BTDP43251 543 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 GRAPQ13588 217 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 ZNF804AQ7Z570 1209 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 ZNF713Q8N859 430 aaPredicted RBP16.75■□□□□ 0.27
C9orf78-204ENST00000461762 SPATA4Q8NEY3 305 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 GRAPLQ8TC17 118 aaPredicted RBP16.75■□□□□ 0.27
C9orf78-204ENST00000461762 RAD54LQ92698 747 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 OSBPL9Q96SU4 736 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 MMRN2Q9H8L6 949 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 LRRC53A6NM62 1247 aa16.75■□□□□ 0.27
C9orf78-204ENST00000461762 USP17L5A8MUK1 530 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms