RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ZBED4O75132 1171 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 FARP2O94887 1054 aaPredicted RBP17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 NR5A1Q13285 461 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 ABRAQ8N0Z2 381 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 OXER1Q8TDS5 423 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 CUL5Q93034 780 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 ATG4CQ96DT6 458 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 SPATA32Q96LK8 384 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 HTATIP2Q9BUP3 242 aa17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 RANBP17Q9H2T7 1088 aaKnown RBP17.35■□□□□ 0.37
TMEM39A-203ENST00000461654 A0A0G2JMZ2 1700 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 PRKAR2AP13861 404 aaKnown RBP17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 ERCC3P19447 782 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 CACNB2Q08289 660 aaPredicted RBP17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 NBR1Q14596 966 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 CCL14Q16627 93 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 MCTP2Q6DN12 878 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 TYW1BQ6NUM6 668 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 CCDC174Q6PII3 467 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 KRT25Q7Z3Z0 450 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 REXO1Q8N1G1 1221 aaKnown RBP17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 CHAMP1Q96JM3 812 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 FBXO28Q9NVF7 368 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 OGDHLQ9ULD0 1010 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 PPP1R9AQ9ULJ8 1098 aa17.34■□□□□ 0.37
TMEM39A-203ENST00000461654 VWA5AO00534 786 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 PPP1R11O60927 126 aaPredicted RBP17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 SLC25A27O95847 323 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 SNAP25P60880 206 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 CEBPZQ03701 1054 aaKnown RBP17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 TMEM132BQ14DG7 1078 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 SKOR2Q2VWA4 1001 aaPredicted RBP17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 USH1GQ495M9 461 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 WDR78Q5VTH9 848 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 TEX2Q8IWB9 1127 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 TMEM87AQ8NBN3 555 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 PSTPIP2Q9H939 334 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 RIC8AQ9NPQ8 531 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 CEP131Q9UPN4 1083 aa17.33■□□□□ 0.36
TMEM39A-203ENST00000461654 GOLGA6L4A6NEF3 574 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 STK38Q15208 465 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 NPY5RQ15761 445 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 MFSD14CQ5VZR4 134 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 ANO1Q5XXA6 986 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 OLFML2BQ68BL8 750 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 RIOX2Q8IUF8 465 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 REPS2Q8NFH8 660 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 NPLOC4Q8TAT6 608 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 USP28Q96RU2 1077 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 GDPD2Q9HCC8 539 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 RTEL1Q9NZ71 1219 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 FLRT1Q9NZU1 646 aa17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
TMEM39A-203ENST00000461654 ELP1O95163 1332 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 ABCB11O95342 1321 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 SLC34A2O95436 690 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 YEATS4O95619 227 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 ICAM1P05362 532 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 ADORA2AP29274 412 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 COPB2P35606 906 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 MNX1P50219 401 aaPredicted RBP17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 LHX8Q68G74 356 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 NECAB2Q7Z6G3 386 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 DPF3Q92784 378 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 SLC5A4Q9NY91 659 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 ZNF214Q9UL59 606 aaPredicted RBP17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 CCPG1Q9ULG6 757 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
TMEM39A-203ENST00000461654 H0YGN5 161 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 BMP15O95972 392 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 CCND3P30281 292 aaPredicted RBP17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 STAT3P40763 770 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 PLS1Q14651 629 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 DPP9Q86TI2 863 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 KCNG4Q8TDN1 519 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 TNFRSF25Q93038 417 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 PAWRQ96IZ0 340 aaKnown RBP17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 SLC38A10Q9HBR0 1119 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 RCOR1Q9UKL0 485 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 PARP14Q460N5 1801 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 ZNF236Q9UL36 1845 aa17.3■□□□□ 0.36
TMEM39A-203ENST00000461654 BAZ2BQ9UIF8 2168 aaKnown RBP17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 ATP2A1O14983 1001 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 COBLO75128 1261 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 MBD3O95983 291 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 FCER1AP12319 257 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 ATP2B1P20020 1258 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 NASPP49321 788 aaPredicted RBP17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 OAZ1P54368 228 aa17.29■□□□□ 0.36
TMEM39A-203ENST00000461654 CPXCR1Q8N123 301 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms