RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GPR85P60893 370 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 EGR3Q06889 387 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 PLEKHG6Q3KR16 790 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 DENND5AQ6IQ26 1287 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 PKN3Q6P5Z2 889 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 RSPO2Q6UXX9 243 aaPredicted RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 TMPRSS7Q7RTY8 843 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 WAPLQ7Z5K2 1190 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 CPNE8Q86YQ8 564 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 PLD6Q8N2A8 252 aaKnown RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 USHBP1Q8N6Y0 703 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 KREMEN2Q8NCW0 462 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 OR2W6PQ8NHA6 318 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 PTCHD1Q96NR3 888 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 FAM126AQ9BYI3 521 aaPredicted RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 CABP5Q9NP86 173 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 TYW1Q9NV66 732 aaKnown RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 BSDC1Q9NW68 430 aaPredicted RBP4.33□□□□□ -1.72
VCL-203ENST00000461383 SAMD15Q9P1V8 674 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 PCDHA2Q9Y5H9 948 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 PCDHA11Q9Y5I1 949 aa4.33□□□□□ -1.72
VCL-203ENST00000461383 FGF10O15520 208 aaPredicted RBP4.32□□□□□ -1.72
VCL-203ENST00000461383 GAS7O60861 476 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 NPTXRO95502 500 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 JUNBP17275 347 aaPredicted RBP4.32□□□□□ -1.72
VCL-203ENST00000461383 GUCY2FP51841 1108 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 ST5P78524 1137 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 CYP4F3Q08477 520 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 PAK1Q13153 545 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 PCBP1Q15365 356 aaKnown RBP eCLIP4.32□□□□□ -1.72
VCL-203ENST00000461383 KIZQ2M2Z5 673 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 FAM47CQ5HY64 1035 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 ODR4Q5SWX8 454 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 CDCA2Q69YH5 1023 aaPredicted RBP4.32□□□□□ -1.72
VCL-203ENST00000461383 ZCCHC8Q6NZY4 707 aaKnown RBP4.32□□□□□ -1.72
VCL-203ENST00000461383 CYP2R1Q6VVX0 501 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 AFAP1L2Q8N4X5 818 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 POU5F2Q8N7G0 328 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 WDR66Q8TBY9 1149 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 HRASLS5Q96KN8 279 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 TTC1Q99614 292 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 IRF2BPLQ9H1B7 796 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 BTG4Q9NY30 223 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 TMEFF2Q9UIK5 374 aaPredicted RBP4.32□□□□□ -1.72
VCL-203ENST00000461383 G3BP2Q9UN86 482 aaKnown RBP4.32□□□□□ -1.72
VCL-203ENST00000461383 PLAGL2Q9UPG8 496 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 ZKSCAN5Q9Y2L8 839 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 SNX11Q9Y5W9 270 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 U3KQE9 123 aa4.32□□□□□ -1.72
VCL-203ENST00000461383 GSTA4O15217 222 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 BRINP1O60477 761 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 NPHS1O60500 1241 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 LCP1P13796 627 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 POU3F2P20265 443 aaPredicted RBP4.31□□□□□ -1.72
VCL-203ENST00000461383 PMLP29590 882 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 DNM2P50570 870 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 IL2P60568 153 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 EXOSC10Q01780 885 aaKnown RBP4.31□□□□□ -1.72
VCL-203ENST00000461383 DHCR24Q15392 516 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 RTP2Q5QGT7 225 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 LBX2Q6XYB7 198 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 NOL8Q76FK4 1167 aaKnown RBP4.31□□□□□ -1.72
VCL-203ENST00000461383 STRA8Q7Z7C7 330 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 WFDC3Q8IUB2 231 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 CCDC103Q8IW40 242 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 IGSF22Q8N9C0 903 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 AGBL5Q8NDL9 886 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 RCBTB1Q8NDN9 531 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 PI4K2BQ8TCG2 481 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 PANK1Q8TE04 598 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 STAG1Q8WVM7 1258 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 ASB11Q8WXH4 323 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 JDP2Q8WYK2 163 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 MMP19Q99542 508 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 ATP13A1Q9HD20 1204 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 COQ6Q9Y2Z9 468 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 TIMM13Q9Y5L4 95 aaPredicted RBP4.31□□□□□ -1.72
VCL-203ENST00000461383 NPFFR2Q9Y5X5 522 aa4.31□□□□□ -1.72
VCL-203ENST00000461383 PITPNM2Q9BZ72 1349 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 A0A1W2PQ27 194 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 A0A1W2PQ64 194 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 A0A1W2PQC6 194 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 A0A1W2PQD8 194 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 FAM47E-STBD1D6RA91 191 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 M0R2C6 588 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 MSCO60682 206 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 SOD2P04179 222 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 PYGMP11217 842 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 GRK2P25098 689 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 GRK3P35626 688 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 GTF2A2P52657 109 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 RPL11P62913 178 aaKnown RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 TMPRSS15P98073 1019 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 RBM10P98175 930 aaKnown RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 IKZF1Q13422 519 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 LSAMPQ13449 338 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 TESK1Q15569 626 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 SEPT7Q16181 437 aaKnown RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 AOC3Q16853 763 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms