RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 FLOT1O75955 427 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 FAM13AO94988 1023 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 MYL1P05976 194 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 FCER1AP12319 257 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 GPBP1Q86WP2 473 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 ANKS4BQ8N8V4 417 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 MAGEF1Q9HAY2 307 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 PCDHB13Q9Y5F0 798 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 XDHP47989 1333 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 LAD1O00515 517 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 UFL1O94874 794 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 CCDC172P0C7W6 258 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 EZRP15311 586 aaKnown RBP15.93■□□□□ 0.14
NCL-207ENST00000461347 RPL13P26373 211 aaKnown RBP15.93■□□□□ 0.14
NCL-207ENST00000461347 TADA2BQ86TJ2 420 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 SLC44A5Q8NCS7 719 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 DCP1AQ9NPI6 582 aaPredicted RBP15.93■□□□□ 0.14
NCL-207ENST00000461347 PANK4Q9NVE7 773 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 ADAMTS1Q9UHI8 967 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 FAM169AQ9Y6X4 670 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 VIMP08670 466 aaKnown RBP15.93■□□□□ 0.14
NCL-207ENST00000461347 IFT88Q13099 833 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 EARS2Q5JPH6 523 aaKnown RBP15.93■□□□□ 0.14
NCL-207ENST00000461347 ELOA2Q8IYF1 753 aaPredicted RBP15.93■□□□□ 0.14
NCL-207ENST00000461347 ADSSL1Q8N142 457 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 RASAL2Q9UJF2 1139 aa15.93■□□□□ 0.14
NCL-207ENST00000461347 LRRIQ3A6PVS8 624 aaPredicted RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 KRIT1O00522 736 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 EPB41P11171 864 aaKnown RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 ABCB4P21439 1286 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 STAG2Q8N3U4 1231 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 ZNF512BQ96KM6 892 aaPredicted RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 PSD3Q9NYI0 1048 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 UTP11Q9Y3A2 253 aaKnown RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 XIRP1Q702N8 1843 aaKnown RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 JCADQ9P266 1359 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 A0A1W2PQC6 194 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 PIGSQ96S52 555 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 LRRC1Q9BTT6 524 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 SMARCAL1Q9NZC9 954 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 A0A087X0B3 334 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 LRRC53A6NM62 1247 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 HGSO14964 777 aaPredicted RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 SARSP49591 514 aaKnown RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 FKBP3Q00688 224 aaKnown RBP15.92■□□□□ 0.14
NCL-207ENST00000461347 ADAM9Q13443 819 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 STXBP4Q6ZWJ1 553 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 COA7Q96BR5 231 aa15.92■□□□□ 0.14
NCL-207ENST00000461347 KLK7P49862 253 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 ANKRD40Q6AI12 368 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 FAM133AQ8N9E0 248 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 MSANTD4Q8NCY6 345 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 SPATA4Q8NEY3 305 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 U2AF1L4Q8WU68 220 aaKnown RBP15.91■□□□□ 0.14
NCL-207ENST00000461347 NBPF3Q9H094 633 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 EFCC1Q9HA90 598 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 ARMCX3Q9UH62 379 aaPredicted RBP15.91■□□□□ 0.14
NCL-207ENST00000461347 RTCBQ9Y3I0 505 aaKnown RBP15.91■□□□□ 0.14
NCL-207ENST00000461347 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 STRCQ7RTU9 1775 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 EMBQ6PCB8 327 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 OSBPL9Q96SU4 736 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 ZNF804BA4D1E1 1349 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 GFPT1Q06210 699 aaPredicted RBP15.91■□□□□ 0.14
NCL-207ENST00000461347 CDKAL1Q5VV42 579 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 ICE2Q659A1 982 aa15.91■□□□□ 0.14
NCL-207ENST00000461347 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
NCL-207ENST00000461347 KIF4AO95239 1232 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 UHMK1Q8TAS1 419 aaKnown RBP15.9■□□□□ 0.14
NCL-207ENST00000461347 SAMD15Q9P1V8 674 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 HPCAL4Q9UM19 191 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 DUSP10Q9Y6W6 482 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 CHMP2AO43633 222 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 MDM2Q00987 491 aaPredicted RBP15.9■□□□□ 0.14
NCL-207ENST00000461347 TROAPQ12815 778 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 STK4Q13043 487 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 DGKHQ86XP1 1220 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 PAIP2Q9BPZ3 127 aaKnown RBP15.9■□□□□ 0.14
NCL-207ENST00000461347 MTRF1LQ9UGC7 380 aaKnown RBP15.9■□□□□ 0.14
NCL-207ENST00000461347 KIAA1024Q9UPX6 916 aa15.9■□□□□ 0.14
NCL-207ENST00000461347 POTEMA6NI47 508 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 GCNT3O95395 438 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
NCL-207ENST00000461347 NR1D1P20393 614 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 TNFAIP3P21580 790 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 LACRTQ9GZZ8 138 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 TMEM60Q9H2L4 133 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 KANSL2Q9H9L4 492 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 MAP2K2P36507 400 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 PNMA8AQ86V59 439 aaPredicted RBP15.89■□□□□ 0.13
NCL-207ENST00000461347 NSRP1Q9H0G5 558 aaKnown RBP15.89■□□□□ 0.13
NCL-207ENST00000461347 SNX12Q9UMY4 172 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 COL4A3BPQ9Y5P4 624 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 PRPHP41219 470 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 CCNI2Q6ZMN8 369 aaPredicted RBP15.89■□□□□ 0.13
NCL-207ENST00000461347 TMEM139Q8IV31 216 aa15.89■□□□□ 0.13
NCL-207ENST00000461347 SH2D3CQ8N5H7 860 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms