RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
DNMT3A-207ENST00000461228 PDE4DQ08499 809 aa17.12■□□□□ 0.33
DNMT3A-207ENST00000461228 TTLL4Q14679 1199 aa17.12■□□□□ 0.33
DNMT3A-207ENST00000461228 SCLYQ96I15 445 aa17.12■□□□□ 0.33
DNMT3A-207ENST00000461228 PTPDC1A2A3K4 754 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 CA3P07451 260 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 IQCF3P0C7M6 154 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 BMP1P13497 986 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 VPS53Q5VIR6 699 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 EMID1Q96A84 441 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 RNF41Q9H4P4 317 aaPredicted RBP17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 LMCD1Q9NZU5 365 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 MTCH2Q9Y6C9 303 aa17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
DNMT3A-207ENST00000461228 EFCAB14O75071 495 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 CYP2C9P11712 490 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 PTGS1P23219 599 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 RABGGTBP53611 331 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 GHRHRQ02643 423 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 NBPF20Q3BBV1 942 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 TMEM63BQ5T3F8 832 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 RALGAPA2Q2PPJ7 1873 aa17.1■□□□□ 0.33
DNMT3A-207ENST00000461228 SLC16A2P36021 539 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 PLA2G5P39877 138 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 MCMDC2Q4G0Z9 681 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 CCDC178Q5BJE1 867 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 CCDC62Q6P9F0 684 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 RETREG2Q8NC44 543 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 PCDHB15Q9Y5E8 787 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 DDX49Q9Y6V7 483 aaKnown RBP17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 CCDC171Q6TFL3 1326 aa17.09■□□□□ 0.33
DNMT3A-207ENST00000461228 ABCB11O95342 1321 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 KIF28PB7ZC32 967 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 FGAP02671 866 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 CXCL10P02778 98 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 MYL3P08590 195 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 HSPD1P10809 573 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 HOXD8P13378 290 aaPredicted RBP17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 SNAP25P60880 206 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 TAP1Q03518 808 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 TTBK2Q6IQ55 1244 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 PURBQ96QR8 312 aaKnown RBP17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 IWS1Q96ST2 819 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 KATNAL1Q9BW62 490 aa17.08■□□□□ 0.32
DNMT3A-207ENST00000461228 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 MMP3P08254 477 aa17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 TXNP10599 105 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 CALML3P27482 149 aa17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 PDE1AP54750 535 aa17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 ESR2Q92731 530 aa17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
DNMT3A-207ENST00000461228 FRMPD2Q68DX3 1309 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 F2P00734 622 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 GH1P01241 217 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 MYOGP15173 224 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 AAMPQ13685 434 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 CCDC85BQ15834 202 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 ASPRV1Q53RT3 343 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 FAM47CQ5HY64 1035 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 CNKSR3Q6P9H4 555 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 NSUN6Q8TEA1 469 aaKnown RBP17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 GTF2IRD1Q9UHL9 959 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 NOD1Q9Y239 953 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
DNMT3A-207ENST00000461228 NLRC5Q86WI3 1866 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 ARIH2O95376 493 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 SELPP16109 830 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 KCNJ6P48051 423 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 WDR5P61964 334 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 ARHGAP1Q07960 439 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 MFSD6Q6ZSS7 791 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 LRRC8DQ7L1W4 858 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 DEFB128Q7Z7B8 93 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 MCF2L2Q86YR7 1114 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 SAMD3Q8N6K7 520 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 ANKS1AQ92625 1134 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 MAP3K20Q9NYL2 800 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-207ENST00000461228 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 CDC37Q16543 378 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 PTGISQ16647 500 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 TBC1D10CQ8IV04 446 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 PPTC7Q8NI37 304 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
DNMT3A-207ENST00000461228 NEDD4P46934 1319 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 EMSYQ7Z589 1322 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 EPOPA6NHQ4 379 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 TLL1O43897 1013 aa17.03■□□□□ 0.32
DNMT3A-207ENST00000461228 LPXNO60711 386 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms