RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 ADGRF4Q8IZF3 695 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 PROM2Q8N271 834 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.64
DHFR2-203ENST00000461173 DCAF4Q8WV16 495 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 LARP4BQ92615 738 aaKnown RBP11.02□□□□□ -0.64
DHFR2-203ENST00000461173 MASTLQ96GX5 879 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 NAPGQ99747 312 aaPredicted RBP11.02□□□□□ -0.64
DHFR2-203ENST00000461173 IDI2Q9BXS1 227 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 EDEM3Q9BZQ6 932 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 CPVLQ9H3G5 476 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 DDX4Q9NQI0 724 aaKnown RBP11.02□□□□□ -0.64
DHFR2-203ENST00000461173 NYAP2Q9P242 653 aa11.02□□□□□ -0.64
DHFR2-203ENST00000461173 ATF5Q9Y2D1 282 aaPredicted RBP11.02□□□□□ -0.64
DHFR2-203ENST00000461173 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 CCDC151A5D8V7 595 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 CYP3A7P24462 503 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 USP11P51784 963 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 HNRNPLLQ8WVV9 542 aaKnown RBP11.02□□□□□ -0.65
DHFR2-203ENST00000461173 RAD54LQ92698 747 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 CDK5RAP3Q96JB5 506 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 CNOT6LQ96LI5 555 aaKnown RBP11.02□□□□□ -0.65
DHFR2-203ENST00000461173 MBOAT7Q96N66 472 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 PNMA5Q96PV4 448 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 NT5C3AQ9H0P0 336 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 VAT1LQ9HCJ6 419 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 LZTFL1Q9NQ48 299 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 FHOD1Q9Y613 1164 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
DHFR2-203ENST00000461173 RNF225M0QZC1 329 aaPredicted RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 PSMD14O00487 310 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 CYLC1P35663 651 aaPredicted RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 TXKP42681 527 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 AP3B2Q13367 1082 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 PICALMQ13492 652 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 ZNF569Q5MCW4 686 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 FKBP15Q5T1M5 1219 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 CCDC84Q86UT8 332 aaPredicted RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 LRRC47Q8N1G4 583 aaKnown RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 KCTD17Q8N5Z5 321 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 KIAA0895Q8NCT3 520 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 AKT1S1Q96B36 256 aa11.01□□□□□ -0.65
DHFR2-203ENST00000461173 QTRT2Q9H974 415 aaKnown RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 ZNHIT6Q9NWK9 470 aaKnown RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 COL2A1P02458 1487 aaPredicted RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 FRMPD2Q68DX3 1309 aaPredicted RBP11.01□□□□□ -0.65
DHFR2-203ENST00000461173 MYMKA6NI61 221 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 EIF3CLB5ME19 914 aaKnown RBP11□□□□□ -0.65
DHFR2-203ENST00000461173 SLC37A4O43826 429 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 PNMA6AP0CW24 399 aaPredicted RBP11□□□□□ -0.65
DHFR2-203ENST00000461173 CHMP4BP1P59074 171 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 MIIPQ5JXC2 388 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 WDR59Q6PJI9 974 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 MSANTD4Q8NCY6 345 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 COA7Q96BR5 231 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 EIF3CQ99613 913 aaKnown RBP11□□□□□ -0.65
DHFR2-203ENST00000461173 ARID3AQ99856 593 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 KANSL2Q9H9L4 492 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 TMEM260Q9NX78 707 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 PI4KBQ9UBF8 816 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 RAB21Q9UL25 225 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 TBX3O15119 743 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 KIF20AO95235 890 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 TDP2O95551 362 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 TRIM21P19474 475 aaKnown RBP11□□□□□ -0.65
DHFR2-203ENST00000461173 CRKP46108 304 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 AMPD2Q01433 879 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 MAN2A1Q16706 1144 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 KIF4BQ2VIQ3 1234 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 SNX29Q8TEQ0 813 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 RPGRIP1Q96KN7 1286 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 PLIN2Q99541 437 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 NOC4LQ9BVI4 516 aaKnown RBP11□□□□□ -0.65
DHFR2-203ENST00000461173 UBXN6Q9BZV1 441 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 TSGA10Q9BZW7 698 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 SEMA6BQ9H3T3 888 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 PSTPIP2Q9H939 334 aa11□□□□□ -0.65
DHFR2-203ENST00000461173 DDX25Q9UHL0 483 aaKnown RBP11□□□□□ -0.65
DHFR2-203ENST00000461173 RASSF10A6NK89 507 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 B4DLN1 442 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 KRT86O43790 486 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 PPP1R11O60927 126 aaPredicted RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 COBLO75128 1261 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 IPO7O95373 1038 aaKnown RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 GNA14O95837 355 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 FCER1AP12319 257 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 BRD2P25440 801 aaKnown RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 MTIF2P46199 727 aaKnown RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 STYK1Q6J9G0 422 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 CC2D1AQ6P1N0 951 aaPredicted RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 TATDN1Q6P1N9 297 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms