RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 RCSD1Q6JBY9 416 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 BRAPQ7Z569 592 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 MICALL2Q8IY33 904 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF654Q8IZM8 581 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 CTCFLQ8NI51 663 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 EXOC4Q96A65 974 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 FAM107BQ9H098 131 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 RETREG1Q9H6L5 497 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 DNAJC18Q9H819 358 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 POLR3EQ9NVU0 708 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-219ENST00000461159 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
HDAC9-219ENST00000461159 NAV1Q8NEY1 1877 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 GDF11O95390 407 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 PLA2G4AP47712 749 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 RAB27AP51159 221 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 DBN1Q16643 649 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 DLK2Q6UY11 383 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 SYNE3Q6ZMZ3 975 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 TADA2BQ86TJ2 420 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 CRACR2BQ8N4Y2 399 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-219ENST00000461159 TBC1D5Q92609 795 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 SMARCE1Q969G3 411 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-219ENST00000461159 PNMA2Q9UL42 364 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 FZD1Q9UP38 647 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 DDX60LQ5H9U9 1706 aaKnown RBP9.47□□□□□ -0.89
HDAC9-219ENST00000461159 TIMM44O43615 452 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 MYO1BO43795 1136 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 ORC4O43929 436 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 URI1O94763 535 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-219ENST00000461159 DDNO94850 711 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF202O95125 648 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 GOLGA8HP0CJ92 632 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 C16orf86Q6ZW13 317 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 SPATA21Q7Z572 469 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 LRRN4CLQ8ND94 238 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 CEP95Q96GE4 821 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 C8orf76Q96K31 380 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 CSRNP1Q96S65 589 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 MYOZ2Q9NPC6 264 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 TRPV5Q9NQA5 729 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 CNOT7Q9UIV1 285 aaKnown RBP9.47□□□□□ -0.89
HDAC9-219ENST00000461159 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
HDAC9-219ENST00000461159 GOLGA6L9A6NEM1 432 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 BIN1O00499 593 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 TADA3O75528 432 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 CAPN15O75808 1086 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 PLEKHA8P1O95397 391 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 CCDC175P0C221 793 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 VEGFAP15692 232 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-219ENST00000461159 SESN3P58005 492 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 DEUP1Q05D60 604 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 LRRC31Q6UY01 552 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 STAG2Q8N3U4 1231 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 SLC26A6Q9BXS9 759 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 HOMER3Q9NSC5 361 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 RNF181Q9P0P0 153 aa9.46□□□□□ -0.89
HDAC9-219ENST00000461159 ZNF70Q9UC06 446 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-219ENST00000461159 F8VZ95 297 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 FZD9O00144 591 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 SERPINC1P01008 464 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 PYGLP06737 847 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 LMOD1P29536 600 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-219ENST00000461159 SHMT1P34896 483 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 NF2P35240 595 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 GJA8P48165 433 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 UBASH3AP57075 661 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 FKBP1AP62942 108 aaKnown RBP9.46□□□□□ -0.9
HDAC9-219ENST00000461159 TROAPQ12815 778 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 PRPF4BQ13523 1007 aaKnown RBP9.46□□□□□ -0.9
HDAC9-219ENST00000461159 NCAPHQ15003 741 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 LRRC47Q8N1G4 583 aaKnown RBP9.46□□□□□ -0.9
HDAC9-219ENST00000461159 FANCBQ8NB91 859 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 SHISA4Q96DD7 197 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 AGBL1Q96MI9 1066 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.9
HDAC9-219ENST00000461159 BIN2Q9UBW5 565 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-219ENST00000461159 CLIC4Q9Y696 253 aa9.46□□□□□ -0.9
HDAC9-219ENST00000461159 A0A1B0GUA9 196 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 PYGBP11216 843 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 CMA1P23946 247 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 EPS15P42566 896 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 JAG1P78504 1218 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 HDLBPQ00341 1268 aaKnown RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 GABPAQ06546 454 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 RRP1BQ14684 758 aaKnown RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 GPR162Q16538 588 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 RTN1Q16799 776 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 GJC2Q5T442 439 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 MYSM1Q5VVJ2 828 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-219ENST00000461159 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 AGBL3Q8NEM8 1001 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 CARD6Q9BX69 1037 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 UBXN6Q9BZV1 441 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 FOCADQ5VW36 1801 aa9.45□□□□□ -0.9
HDAC9-219ENST00000461159 EME2A4GXA9 379 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms