RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ARVCFO00192 962 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 VWA5AO00534 786 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 TLR3O15455 904 aaKnown RBP14.55□□□□□ -0.08
HDAC4-207ENST00000461113 SLC25A27O95847 323 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 POU3F3P20264 500 aaPredicted RBP14.55□□□□□ -0.08
HDAC4-207ENST00000461113 RPS6KB1P23443 525 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 ZNF792Q3KQV3 632 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 SYDE2Q5VT97 1194 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 KRT40Q6A162 431 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 RUFY3Q7L099 469 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 FAM126BQ8IXS8 530 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 HLA-CQ95604 372 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 LRRC2Q9BYS8 371 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 LY9Q9HBG7 655 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 PCDHA11Q9Y5I1 949 aa14.55□□□□□ -0.08
HDAC4-207ENST00000461113 A0A0U1RQG5 324 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-207ENST00000461113 PRR33A8MZF0 331 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 ASGR1P07306 291 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 SNHG28P0DPA3 235 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 STAT3P40763 770 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 SLC4A3P48751 1232 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 OAZ1P54368 228 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
HDAC4-207ENST00000461113 NHLH1Q02575 133 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 Q6ZUG5 572 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 CPXCR1Q8N123 301 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 UIMC1Q96RL1 719 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 MAP3K14Q99558 947 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 LZTS2Q9BRK4 669 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 CERS4Q9HA82 394 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 ZSWIM6Q9HCJ5 1215 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 PDRG1Q9NUG6 133 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 FAM184BQ9ULE4 1060 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 SLC4A7Q9Y6M7 1214 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 MYO9BQ13459 2157 aa14.54□□□□□ -0.08
HDAC4-207ENST00000461113 UMODL1Q5DID0 1318 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 EPOPA6NHQ4 379 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 TRAF1Q13077 416 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 KCTD2Q14681 263 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 TMEM132BQ14DG7 1078 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 ANKRD1Q15327 319 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 BTNL9Q6UXG8 535 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 SGMS1Q86VZ5 419 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 TEX13BQ9BXU2 312 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 C22orf23Q9BZE7 217 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 PRR12Q9ULL5 1215 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 ADAMTS5Q9UNA0 930 aa14.53□□□□□ -0.08
HDAC4-207ENST00000461113 DIS3Q9Y2L1 958 aaKnown RBP14.53□□□□□ -0.08
HDAC4-207ENST00000461113 GREB1LQ9C091 1923 aaPredicted RBP14.53□□□□□ -0.08
HDAC4-207ENST00000461113 CCDC196A0A1B0GTZ2 297 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 ZBBXA8MT70 800 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 ZBTB43O43298 467 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 SEC24BO95487 1268 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 CD4P01730 458 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 C6orf222P0C671 652 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-207ENST00000461113 CST5P28325 142 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-207ENST00000461113 SLC16A2P36021 539 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 CCL23P55773 120 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 GRM4Q14833 912 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 TTBK2Q6IQ55 1244 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 RIOX2Q8IUF8 465 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 PCSK9Q8NBP7 692 aaKnown RBP14.52□□□□□ -0.09
HDAC4-207ENST00000461113 TCEANC2Q96MN5 208 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 HIPK3Q9H422 1215 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 SLC38A10Q9HBR0 1119 aa14.52□□□□□ -0.09
HDAC4-207ENST00000461113 RBM28Q9NW13 759 aaKnown RBP14.52□□□□□ -0.09
HDAC4-207ENST00000461113 ZHX1Q9UKY1 873 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-207ENST00000461113 KLF18A0A0U1RQI7 1052 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 DUSP11O75319 330 aaKnown RBP14.51□□□□□ -0.09
HDAC4-207ENST00000461113 CA3P07451 260 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 CPA1P15085 419 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 ATP2A2P16615 1042 aaKnown RBP14.51□□□□□ -0.09
HDAC4-207ENST00000461113 TROAPQ12815 778 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 PPP2R5BQ15173 497 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 TKFCQ3LXA3 575 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 SNRNP48Q6IEG0 339 aaKnown RBP14.51□□□□□ -0.09
HDAC4-207ENST00000461113 MICU3Q86XE3 530 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 BRF1Q92994 677 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 UPF3BQ9BZI7 483 aaKnown RBP14.51□□□□□ -0.09
HDAC4-207ENST00000461113 UBA5Q9GZZ9 404 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 RAVER2Q9HCJ3 691 aaKnown RBP14.51□□□□□ -0.09
HDAC4-207ENST00000461113 VAT1LQ9HCJ6 419 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 GPHNQ9NQX3 736 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-207ENST00000461113 FBXO40Q9UH90 709 aa14.51□□□□□ -0.09
HDAC4-207ENST00000461113 PALM3A6NDB9 673 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-207ENST00000461113 ATP2A1O14983 1001 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 SNAI1O95863 264 aaPredicted RBP14.5□□□□□ -0.09
HDAC4-207ENST00000461113 RCAN1P53805 252 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 RTN1Q16799 776 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 FBXL16Q8N461 479 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 FANCBQ8NB91 859 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 SPC25Q9HBM1 224 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 SENP2Q9HC62 589 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 SEC63Q9UGP8 760 aaKnown RBP14.5□□□□□ -0.09
HDAC4-207ENST00000461113 MAD2L2Q9UI95 211 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 CCPG1Q9ULG6 757 aa14.5□□□□□ -0.09
HDAC4-207ENST00000461113 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms