RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 TAF7LQ5H9L4 462 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 RSPO2Q6UXX9 243 aaPredicted RBP6.85□□□□□ -1.31
VBP1-202ENST00000460509 CEP68Q76N32 757 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 TEX2Q8IWB9 1127 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 DHX37Q8IY37 1157 aaKnown RBP6.85□□□□□ -1.31
VBP1-202ENST00000460509 LILRA2Q8N149 483 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 LZTR1Q8N653 840 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 KIRREL1Q96J84 757 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 FEZ1Q99689 392 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 CLDND1Q9NY35 253 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 PCDHA8Q9Y5H6 950 aa6.85□□□□□ -1.31
VBP1-202ENST00000460509 NOTOA8MTQ0 251 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 CRTAMO95727 393 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 MSL3P1P0C860 447 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 GYS2P54840 703 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 GPR85P60893 370 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 LSAMPQ13449 338 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 FNDC3BQ53EP0 1204 aaKnown RBP6.84□□□□□ -1.31
VBP1-202ENST00000460509 PLEKHG4Q58EX7 1191 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 FYB2Q5VWT5 728 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 BICRALQ6AI39 1079 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 BRAPQ7Z569 592 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 DPF3Q92784 378 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 TRMT2BQ96GJ1 504 aaKnown RBP6.84□□□□□ -1.31
VBP1-202ENST00000460509 TMEM169Q96HH4 297 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
VBP1-202ENST00000460509 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.84□□□□□ -1.31
VBP1-202ENST00000460509 NPFFR2Q9Y5X5 522 aa6.84□□□□□ -1.31
VBP1-202ENST00000460509 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.83□□□□□ -1.32
VBP1-202ENST00000460509 IRS4O14654 1257 aaPredicted RBP6.83□□□□□ -1.32
VBP1-202ENST00000460509 PPP1R11O60927 126 aaPredicted RBP6.83□□□□□ -1.32
VBP1-202ENST00000460509 EFEMP2O95967 443 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 SRGAP2CP0DJJ0 459 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 FPR2P25090 351 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 ARL4AP40617 200 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 GTF2A2P52657 109 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 MVKQ03426 396 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 NR0B2Q15466 257 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 EGFLAMQ63HQ2 1017 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 KIAA0907Q7Z7F0 614 aaPredicted RBP6.83□□□□□ -1.32
VBP1-202ENST00000460509 ASIC4Q96FT7 647 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 ZFYVE21Q9BQ24 234 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 RNF32Q9H0A6 362 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 SP110Q9HB58 689 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 PDLIM7Q9NR12 457 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 PPARGC1AQ9UBK2 798 aaKnown RBP6.83□□□□□ -1.32
VBP1-202ENST00000460509 FBXL7Q9UJT9 491 aa6.83□□□□□ -1.32
VBP1-202ENST00000460509 C22orf46C9J442 243 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 BIN1O00499 593 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 OPA1O60313 960 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 RASGRP1O95267 797 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 TESK1Q15569 626 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 MCTP1Q6DN14 999 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 CNNM4Q6P4Q7 775 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 ZNF662Q6ZS27 426 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 FGD2Q7Z6J4 655 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 NLRX1Q86UT6 975 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
VBP1-202ENST00000460509 NIM1KQ8IY84 436 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 FLAD1Q8NFF5 587 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.82□□□□□ -1.323e-6■□□□□ 8.6
VBP1-202ENST00000460509 KCNJ15Q99712 375 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 ADGRE2Q9UHX3 823 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 ACSL6Q9UKU0 697 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
VBP1-202ENST00000460509 NAT1P18440 290 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 SDSP20132 328 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 SDHBP21912 280 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 PDE6BP35913 854 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 IRAK1P51617 712 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 CORO7P57737 925 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 SNX17Q15036 470 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 KCNMB1Q16558 191 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 KIZQ2M2Z5 673 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 DALRD3Q5D0E6 543 aaKnown RBP6.81□□□□□ -1.32
VBP1-202ENST00000460509 TRIM61Q5EBN2 209 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 ATG4DQ86TL0 474 aaPredicted RBP6.81□□□□□ -1.32
VBP1-202ENST00000460509 CABP7Q86V35 215 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 NINJ1Q92982 152 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 JAM3Q9BX67 310 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 TRIM39Q9HCM9 518 aa6.81□□□□□ -1.32
VBP1-202ENST00000460509 COA3Q9Y2R0 106 aaPredicted RBP6.81□□□□□ -1.32
VBP1-202ENST00000460509 RFPL3O75679 317 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 SOD2P04179 222 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 GRK2P25098 689 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 GRK3P35626 688 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 PAK1Q13153 545 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 ADGRF1Q5T601 910 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 CBLL1Q75N03 491 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 GSTCDQ8NEC7 633 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 NLGN2Q8NFZ4 835 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 SCLYQ96I15 445 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 IPPKQ9H8X2 491 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 RXFP1Q9HBX9 757 aa6.8□□□□□ -1.32
VBP1-202ENST00000460509 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.8□□□□□ -1.32
VBP1-202ENST00000460509 DBR1Q9UK59 544 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms