RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, human

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-215	ENST00000460158	CBX2	Q14781	532 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	SLC14A2	Q15849	920 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	HSF5	Q4G112	596 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	E4F1	Q66K89	784 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	KCNT2	Q6UVM3	1135 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	JAML	Q86YT9	394 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	SPPL2C	Q8IUH8	684 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	OXR1	Q8N573	874 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	DIO2	Q92813	273 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	PLCD4	Q9BRC7	762 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	NPFFR2	Q9Y5X5	522 aa		4.9	□□□□□ -1.63
VPS8-215	ENST00000460158	ASXL2	Q76L83	1435 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	TRBV23OR9-2	A0A075B6M9	112 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	CCDC163	A0A0D9SF12	145 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158		A0A1W2PQ45	241 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-215	ENST00000460158		A0A1W2PQY0	241 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	FITM1	A5D6W6	292 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	WTIP	A6NIX2	430 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	NRDC	O43847	1150 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	PPP1R11	O60927	126 aa	Predicted RBP	4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	RAPGEF3	O95398	923 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	LTBR	P36941	435 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	GALK1	P51570	392 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	KCNAB2	Q13303	367 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	NR0B2	Q15466	257 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	TESK1	Q15569	626 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	C21orf62-AS1	Q17RA5	79 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	TKFC	Q3LXA3	575 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	IQCE	Q6IPM2	695 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	TTLL10	Q6ZVT0	673 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	C16orf86	Q6ZW13	317 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	RCBTB1	Q8NDN9	531 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	DCAF4	Q8WV16	495 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	MYLIP	Q8WY64	445 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	PHF20	Q9BVI0	1012 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	NSUN3	Q9H649	340 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	NCOA5	Q9HCD5	579 aa	Known RBP	4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	IMPACT	Q9P2X3	320 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	TRAF6	Q9Y4K3	522 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	CADPS	Q9ULU8	1353 aa		4.89	□□□□□ -1.63
VPS8-215	ENST00000460158	PRRG2	O14669	202 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	MSC	O60682	206 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	TMEM253	P0C7T8	217 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	MED14OS	P0DP75	135 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	HSP90B1	P14625	803 aa	Known RBP	4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	RAC2	P15153	192 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	STYK1	Q6J9G0	422 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	GALNT18	Q6P9A2	607 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	SLC7A14	Q8TBB6	771 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	DPF3	Q92784	378 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	PTPRN2	Q92932	1015 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	CLUHP3	Q96NS8	147 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	DIRC2	Q96SL1	478 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	SLC52A2	Q9HAB3	445 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	GULP1	Q9UBP9	304 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	FBXL7	Q9UJT9	491 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	PCDHA2	Q9Y5H9	948 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	CD2AP	Q9Y5K6	639 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	TAF6L	Q9Y6J9	622 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	NCAN	O14594	1321 aa		4.88	□□□□□ -1.63
VPS8-215	ENST00000460158	PLD2	O14939	933 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	NPHS1	O60500	1241 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	MSL3P1	P0C860	447 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	PRKCA	P17252	672 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	GLDC	P23378	1020 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	HSD3B2	P26439	372 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	GABRE	P78334	506 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	MVK	Q03426	396 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	TCEA2	Q15560	299 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	LCE5A	Q5TCM9	118 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	NLRX1	Q86UT6	975 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	SIRT2	Q8IXJ6	389 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	LILRA2	Q8N149	483 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	NUP43	Q8NFH3	380 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	ABHD4	Q8TB40	342 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	SHISA4	Q96DD7	197 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	MRPL4	Q9BYD3	311 aa	Known RBP	4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	RNF32	Q9H0A6	362 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	EPB41L4B	Q9H329	900 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	CD320	Q9NPF0	282 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	GPR27	Q9NS67	375 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	BTG4	Q9NY30	223 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	NDOR1	Q9UHB4	597 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	GPR160	Q9UJ42	338 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	ACSL6	Q9UKU0	697 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	RWDD3	Q9Y3V2	267 aa		4.87	□□□□□ -1.63
VPS8-215	ENST00000460158	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.86	□□□□□ -1.63
VPS8-215	ENST00000460158		A0A1W2PQ27	194 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158		A0A1W2PQ64	194 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158		A0A1W2PQC6	194 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158		A0A1W2PQD8	194 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158	NPIPB6	E9PJ23	425 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158	BCL6	P41182	706 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158	RPL11	P62913	178 aa	Known RBP	4.86	□□□□□ -1.63
VPS8-215	ENST00000460158	KCNA10	Q16322	511 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158	PLEKHG4	Q58EX7	1191 aa		4.86	□□□□□ -1.63
VPS8-215	ENST00000460158	TRIM61	Q5EBN2	209 aa		4.86	□□□□□ -1.63

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