RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 PCSK9Q8NBP7 692 aaKnown RBP16.32■□□□□ 0.2
NECAP2-204ENST00000459640 NSUN6Q8TEA1 469 aaKnown RBP16.32■□□□□ 0.2
NECAP2-204ENST00000459640 KCNB2Q92953 911 aa16.32■□□□□ 0.2
NECAP2-204ENST00000459640 VTI1AQ96AJ9 217 aa16.32■□□□□ 0.2
NECAP2-204ENST00000459640 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
NECAP2-204ENST00000459640 GDF15Q99988 308 aa16.32■□□□□ 0.2
NECAP2-204ENST00000459640 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
NECAP2-204ENST00000459640 BRPF3Q9ULD4 1205 aa16.32■□□□□ 0.2
NECAP2-204ENST00000459640 DOCK5Q9H7D0 1870 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 hCG_1642624A0A1W2PR95 340 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 RBM47A0AV96 593 aaKnown RBP16.31■□□□□ 0.2
NECAP2-204ENST00000459640 B4DLN1 442 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 GNAQP50148 359 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 MRPL12P52815 198 aaKnown RBP16.31■□□□□ 0.2
NECAP2-204ENST00000459640 NKX3-2P78367 333 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 PPP2R5BQ15173 497 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 DUSP28Q4G0W2 176 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 CXCL17Q6UXB2 119 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 SH3RF1Q7Z6J0 888 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 OR6J1Q8NGC5 347 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 COPS5Q92905 334 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 GLT1D1Q96MS3 346 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 MAF1Q9H063 256 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
NECAP2-204ENST00000459640 SEC63Q9UGP8 760 aaKnown RBP16.31■□□□□ 0.2
NECAP2-204ENST00000459640 GCOM1H8Y6P7 765 aaPredicted RBP16.3■□□□□ 0.2
NECAP2-204ENST00000459640 ARIH2O95376 493 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 POLR2MP0CAP2 368 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 GHRHRQ02643 423 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 C1orf53Q5VUE5 145 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 TMTC3Q6ZXV5 915 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 FCHSD1Q86WN1 690 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 SCFD2Q8WU76 684 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 PRKAG2Q9UGJ0 569 aa16.3■□□□□ 0.2
NECAP2-204ENST00000459640 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
NECAP2-204ENST00000459640 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 TRIM43BA6NCK2 446 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 MYCLP12524 364 aaPredicted RBP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 TRAF1Q13077 416 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 STXBP2Q15833 593 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 BLOC1S2Q6QNY1 142 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 IL31RAQ8NI17 732 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 TRIM43Q96BQ3 446 aaPredicted RBP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 ZFP91Q96JP5 570 aaPredicted RBP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 UBE2OQ9C0C9 1292 aaKnown RBP16.29■□□□□ 0.2
NECAP2-204ENST00000459640 Q9Y3F1 56 aa16.29■□□□□ 0.2
NECAP2-204ENST00000459640 ELP1O95163 1332 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 CNTNAP5Q8WYK1 1306 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 A0A0U1RQG5 324 aaPredicted RBP16.28■□□□□ 0.2
NECAP2-204ENST00000459640 ZBTB43O43298 467 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 NR3C2P08235 984 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 CLTBP09497 229 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 SMARCA1P28370 1054 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 PSMC6P62333 389 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 FGD1P98174 961 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 APOBRQ0VD83 1088 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 TTLL4Q14679 1199 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 RTN1Q16799 776 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 Q6ZUG5 572 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 LBHD1Q9BQE6 289 aaPredicted RBP16.28■□□□□ 0.2
NECAP2-204ENST00000459640 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
NECAP2-204ENST00000459640 RANBP2P49792 3224 aaKnown RBP16.27■□□□□ 0.2
NECAP2-204ENST00000459640 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 ZEB2O60315 1214 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 MYL3P08590 195 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.2
NECAP2-204ENST00000459640 BMP8BP34820 402 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 FAAP100Q0VG06 881 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 PGM5Q15124 567 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 LY6KQ17RY6 165 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.2
NECAP2-204ENST00000459640 BRF1Q92994 677 aa16.27■□□□□ 0.2
NECAP2-204ENST00000459640 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
NECAP2-204ENST00000459640 SCN10AQ9Y5Y9 1956 aa16.27■□□□□ 0.19
NECAP2-204ENST00000459640 ARVCFO00192 962 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 NKRFO15226 690 aaKnown RBP eCLIP16.26■□□□□ 0.19
NECAP2-204ENST00000459640 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 ITGB8P26012 769 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 CDC27P30260 824 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 CPT1AP50416 773 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 CDK7P50613 346 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 ANKRD33Q7Z3H0 272 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 HEATR3Q7Z4Q2 680 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 SAMD3Q8N6K7 520 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 PPP1R13LQ8WUF5 828 aa16.26■□□□□ 0.19
NECAP2-204ENST00000459640 BADQ92934 168 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms