RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 GGCXP38435 758 aa15.75■□□□□ 0.11
SCFD1-203ENST00000458591 KRT25Q7Z3Z0 450 aa15.75■□□□□ 0.11
SCFD1-203ENST00000458591 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
SCFD1-203ENST00000458591 LRRC1Q9BTT6 524 aa15.75■□□□□ 0.11
SCFD1-203ENST00000458591 NYXQ9GZU5 481 aa15.75■□□□□ 0.11
SCFD1-203ENST00000458591 C6orf50Q9HD87 102 aa15.75■□□□□ 0.11
SCFD1-203ENST00000458591 DMGDHQ9UI17 866 aaKnown RBP15.75■□□□□ 0.11
SCFD1-203ENST00000458591 ROBO1Q9Y6N7 1651 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 LRRC53A6NM62 1247 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 BAG3O95817 575 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 VAV2P52735 878 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 KIF5AQ12840 1032 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 VWA3BQ502W6 1294 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 LRRC31Q6UY01 552 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 RRAGAQ7L523 313 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 CREG2Q8IUH2 290 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
SCFD1-203ENST00000458591 LRRC47Q8N1G4 583 aaKnown RBP15.74■□□□□ 0.11
SCFD1-203ENST00000458591 FAM71BQ8TC56 605 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 PURBQ96QR8 312 aaKnown RBP15.74■□□□□ 0.11
SCFD1-203ENST00000458591 FGFBP2Q9BYJ0 223 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 ACBD3Q9H3P7 528 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 NDST4Q9H3R1 872 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 PCDHA13Q9Y5I0 950 aa15.74■□□□□ 0.11
SCFD1-203ENST00000458591 BICDL2A1A5D9 508 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 AGPSO00116 658 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 PRPF6O94906 941 aaKnown RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 DNA2P51530 1060 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 UBE2SQ16763 222 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 SOGA3Q5TF21 947 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 CCNI2Q6ZMN8 369 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 TEX11Q8IYF3 940 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 WDR66Q8TBY9 1149 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 ERGIC2Q96RQ1 377 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 NUP58Q9BVL2 599 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 SELENOOQ9BVL4 669 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 TBC1D7Q9P0N9 293 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 LAD1O00515 517 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 BUB1O43683 1085 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 IPO7O95373 1038 aaKnown RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 MYL1P05976 194 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 KIF11P52732 1056 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 GPSM2P81274 684 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 GFPT1Q06210 699 aaPredicted RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 CENPPQ6IPU0 288 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 GALNT17Q6IS24 598 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 SV2BQ7L1I2 683 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 SPZ1Q9BXG8 430 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 IFIH1Q9BYX4 1025 aaKnown RBP15.73■□□□□ 0.11
SCFD1-203ENST00000458591 GPCPD1Q9NPB8 672 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 WNK3Q9BYP7 1800 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 ROBO3Q96MS0 1386 aa15.73■□□□□ 0.11
SCFD1-203ENST00000458591 RPS6KA4O75676 772 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 IVLP07476 585 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 CCDC170Q8IYT3 715 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 REXO1Q8N1G1 1221 aaKnown RBP15.72■□□□□ 0.11
SCFD1-203ENST00000458591 CALML4Q96GE6 196 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 AK8Q96MA6 479 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 MYO1CO00159 1063 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 PPP4CP60510 307 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 PICALMQ13492 652 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 SPA17Q15506 151 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 CALCRLQ16602 461 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 CCDC47Q96A33 483 aaKnown RBP15.72■□□□□ 0.11
SCFD1-203ENST00000458591 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 NLRC4Q9NPP4 1024 aa15.72■□□□□ 0.11
SCFD1-203ENST00000458591 SEC63Q9UGP8 760 aaKnown RBP15.72■□□□□ 0.11
SCFD1-203ENST00000458591 GOLGB1Q14789 3259 aaKnown RBP15.72■□□□□ 0.11
SCFD1-203ENST00000458591 ENOX2Q16206 610 aaKnown RBP15.71■□□□□ 0.11
SCFD1-203ENST00000458591 CNNM4Q6P4Q7 775 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 EHD4Q9H223 541 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 CUEDC2Q9H467 287 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 DEF6Q9H4E7 631 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 SH2D4AQ9H788 454 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 RSPH14Q9UHP6 348 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 SNX12Q9UMY4 172 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 PLAGL2Q9UPG8 496 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 CNTNAP4Q9C0A0 1308 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 GNA11P29992 359 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 TNNI2P48788 182 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 RASSF7Q02833 373 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 FAM114A1Q8IWE2 563 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 LARP4BQ92615 738 aaKnown RBP15.71■□□□□ 0.11
SCFD1-203ENST00000458591 DDX12PQ92771 950 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 TRIM34Q9BYJ4 488 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 TANGO6Q9C0B7 1094 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 RASSF4Q9H2L5 321 aa15.71■□□□□ 0.11
SCFD1-203ENST00000458591 RRP15Q9Y3B9 282 aaKnown RBP15.71■□□□□ 0.11
SCFD1-203ENST00000458591 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 AKR1B10O60218 316 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms