RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 DYNLL2Q96FJ2 89 aa19.53■□□□□ 0.72
SF3B4-202ENST00000457312 IGFLR1Q9H665 355 aa19.53■□□□□ 0.72
SF3B4-202ENST00000457312 A1CFQ9NQ94 594 aaKnown RBP19.53■□□□□ 0.72
SF3B4-202ENST00000457312 IDH1O75874 414 aaKnown RBP19.52■□□□□ 0.72
SF3B4-202ENST00000457312 ADAM15Q13444 863 aa19.52■□□□□ 0.72
SF3B4-202ENST00000457312 PHF7Q9BWX1 381 aaPredicted RBP19.52■□□□□ 0.72
SF3B4-202ENST00000457312 SLC38A10Q9HBR0 1119 aa19.52■□□□□ 0.72
SF3B4-202ENST00000457312 VTA1Q9NP79 307 aa19.52■□□□□ 0.72
SF3B4-202ENST00000457312 GPHNQ9NQX3 736 aaPredicted RBP19.52■□□□□ 0.72
SF3B4-202ENST00000457312 HOMER2Q9NSB8 354 aa19.52■□□□□ 0.72
SF3B4-202ENST00000457312 USP15Q9Y4E8 981 aaPredicted RBP19.52■□□□□ 0.72
SF3B4-202ENST00000457312 MYH4Q9Y623 1939 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 AMHP03971 560 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 ACAP1Q15027 740 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 KIAA1211Q6ZU35 1233 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 RPGRIP1Q96KN7 1286 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 LMAN2LQ9H0V9 348 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 PRKRIP1Q9H875 184 aaPredicted RBP19.51■□□□□ 0.71
SF3B4-202ENST00000457312 CLEC1BQ9P126 229 aa19.51■□□□□ 0.71
SF3B4-202ENST00000457312 USP17L12C9JPN9 530 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 USP17L21D6R901 530 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 GRM6O15303 877 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 SRGAP3O43295 1099 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 ZBED4O75132 1171 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 CKBP12277 381 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 COASYQ13057 564 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 PRPF38AQ8NAV1 312 aaKnown RBP19.5■□□□□ 0.71
SF3B4-202ENST00000457312 YME1L1Q96TA2 773 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 DBNDD2Q9BQY9 259 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 PCDHGC5Q9Y5F6 944 aa19.5■□□□□ 0.71
SF3B4-202ENST00000457312 MBTPS1Q14703 1052 aa19.49■□□□□ 0.71
SF3B4-202ENST00000457312 GDF6Q6KF10 455 aaPredicted RBP19.49■□□□□ 0.71
SF3B4-202ENST00000457312 TRAF7Q6Q0C0 670 aa19.49■□□□□ 0.71
SF3B4-202ENST00000457312 OR6J1Q8NGC5 347 aa19.49■□□□□ 0.71
SF3B4-202ENST00000457312 CCDC17Q96LX7 622 aa19.49■□□□□ 0.71
SF3B4-202ENST00000457312 ACAD9Q9H845 621 aa19.49■□□□□ 0.71
SF3B4-202ENST00000457312 COG6Q9Y2V7 657 aa19.49■□□□□ 0.71
SF3B4-202ENST00000457312 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
SF3B4-202ENST00000457312 C5orf67F2Z3F1 127 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 LGR5O75473 907 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 CTNNB1P35222 781 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 OAZ1P54368 228 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 CCDC158Q5M9N0 1113 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 CTDP1Q9Y5B0 961 aaPredicted RBP19.48■□□□□ 0.71
SF3B4-202ENST00000457312 ZFYVE26Q68DK2 2539 aa19.48■□□□□ 0.71
SF3B4-202ENST00000457312 SETXQ7Z333 2677 aaKnown RBP19.48■□□□□ 0.71
SF3B4-202ENST00000457312 CSPG5O95196 566 aa19.47■□□□□ 0.71
SF3B4-202ENST00000457312 LINC00271P0C7V0 271 aa19.47■□□□□ 0.71
SF3B4-202ENST00000457312 MORC4Q8TE76 937 aa19.47■□□□□ 0.71
SF3B4-202ENST00000457312 KIFC2Q96AC6 838 aa19.47■□□□□ 0.71
SF3B4-202ENST00000457312 ZNF512BQ96KM6 892 aaPredicted RBP19.47■□□□□ 0.71
SF3B4-202ENST00000457312 WDR11Q9BZH6 1224 aa19.47■□□□□ 0.71
SF3B4-202ENST00000457312 ASTLQ6HA08 431 aaPredicted RBP19.46■□□□□ 0.71
SF3B4-202ENST00000457312 SDR42E1Q8WUS8 393 aa19.46■□□□□ 0.71
SF3B4-202ENST00000457312 C11orf84Q9BUA3 381 aaPredicted RBP19.46■□□□□ 0.71
SF3B4-202ENST00000457312 DCP1AQ9NPI6 582 aaPredicted RBP19.46■□□□□ 0.71
SF3B4-202ENST00000457312 FANCMQ8IYD8 2048 aa19.46■□□□□ 0.71
SF3B4-202ENST00000457312 E9PSI1 815 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 NDUFB10O96000 172 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 LMNAP02545 664 aaKnown RBP19.45■□□□□ 0.7
SF3B4-202ENST00000457312 MTX1Q13505 466 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 ZBTB33Q86T24 672 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 SESTD1Q86VW0 696 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 MEIS3Q99687 375 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 CRNKL1Q9BZJ0 848 aaKnown RBP19.45■□□□□ 0.7
SF3B4-202ENST00000457312 RNF146Q9NTX7 359 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 HDAC5Q9UQL6 1122 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 KIAA1671Q9BY89 1806 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 RAD50Q92878 1312 aa19.45■□□□□ 0.7
SF3B4-202ENST00000457312 MAGEB6P1A0A0J9YX57 407 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 KPNA6O60684 536 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 GLP2RO95838 553 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 MMP1P03956 469 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 CHMP4BP1P59074 171 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 DDX10Q13206 875 aaKnown RBP19.44■□□□□ 0.7
SF3B4-202ENST00000457312 BRDTQ58F21 947 aaPredicted RBP19.44■□□□□ 0.7
SF3B4-202ENST00000457312 EFHBQ8N7U6 833 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 KCNG4Q8TDN1 519 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 SSH1Q8WYL5 1049 aa19.44■□□□□ 0.7
SF3B4-202ENST00000457312 BARX2Q9UMQ3 279 aaPredicted RBP19.44■□□□□ 0.7
SF3B4-202ENST00000457312 A6NJR5 290 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 RB1P06400 928 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 HOXB3P14651 431 aaPredicted RBP19.43■□□□□ 0.7
SF3B4-202ENST00000457312 ATF7P17544 494 aaPredicted RBP19.43■□□□□ 0.7
SF3B4-202ENST00000457312 CDK8P49336 464 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 RSPO4Q2I0M5 234 aaPredicted RBP19.43■□□□□ 0.7
SF3B4-202ENST00000457312 TRIM71Q2Q1W2 868 aaKnown RBP19.43■□□□□ 0.7
SF3B4-202ENST00000457312 TNNI3KQ59H18 835 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 DBF4BQ8NFT6 615 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 SUSD6Q92537 303 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 WNT8BQ93098 351 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 TOP1MTQ969P6 601 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 FPGT-TNNI3KV9GXZ4 949 aa19.43■□□□□ 0.7
SF3B4-202ENST00000457312 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
SF3B4-202ENST00000457312 CAMK1Q14012 370 aa19.42■□□□□ 0.7
SF3B4-202ENST00000457312 ZNF618Q5T7W0 954 aa19.42■□□□□ 0.7
SF3B4-202ENST00000457312 TMED8Q6PL24 325 aaPredicted RBP19.42■□□□□ 0.7
SF3B4-202ENST00000457312 ADGRD2Q7Z7M1 963 aa19.42■□□□□ 0.7
SF3B4-202ENST00000457312 KREMEN2Q8NCW0 462 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms