RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 CATIPQ7Z7H3 387 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC13Q8IYE1 715 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 TRIM22Q8IYM9 498 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 B4GALNT2Q8NHY0 566 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-218ENST00000456174 ACTR5Q9H9F9 607 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-218ENST00000456174 MKNK2Q9HBH9 465 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 KCNQ5Q9NR82 932 aa8.49□□□□□ -1.05
HDAC9-218ENST00000456174 ENO4A6NNW6 628 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 PDLIM1O00151 329 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 PDHBP11177 359 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 NT5C2P49902 561 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 TFAP4Q01664 338 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 ROR2Q01974 943 aaKnown RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 KRT40Q6A162 431 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 C10orf71Q711Q0 1435 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 ARMCX6Q7L4S7 300 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CEP57Q86XR8 500 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CMTR1Q8N1G2 835 aaKnown RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CRACR2BQ8N4Y2 399 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 SLC16A10Q8TF71 515 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 ZFAND2BQ8WV99 257 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 WASF1Q92558 559 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 MAF1Q9H063 256 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 TPX2Q9ULW0 747 aaKnown RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 KIF28PB7ZC32 967 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 UBE2Q2LH0YL09 131 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 BIN1O00499 593 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 ECE2O60344 883 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 DDAH1O94760 285 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CALM1P0DP23 149 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CALM2P0DP24 149 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CALM3P0DP25 149 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 FERP16591 822 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 SCNN1DP51172 638 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 KIF23Q02241 960 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 TROAPQ12815 778 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 TRIM29Q14134 588 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 ARMC3Q5W041 872 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 CYB5D1Q6P9G0 228 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 SLC30A9Q6PML9 568 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 ZNF444Q8N0Y2 327 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 USP28Q96RU2 1077 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 FTOQ9C0B1 505 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC9-218ENST00000456174 RTEL1Q9NZ71 1219 aa8.48□□□□□ -1.05
HDAC9-218ENST00000456174 KIF13BQ9NQT8 1826 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GOLGA6CA6NDK9 693 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 DEXIO95424 95 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GOLGA6DP0CG33 693 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TSPY3P0CV98 308 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TSPY8P0CW00 308 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GNGT1P63211 74 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 ZRSR2Q15696 482 aaKnown RBP8.47□□□□□ -1.05
HDAC9-218ENST00000456174 SKIDA1Q1XH10 827 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 HHIPL2Q6UWX4 724 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 BZW1Q7L1Q6 419 aaKnown RBP8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TAX1BP1Q86VP1 789 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 KIRREL3Q8IZU9 778 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TRIM58Q8NG06 486 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 ATL2Q8NHH9 583 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 FAM81AQ8TBF8 368 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC47Q96A33 483 aaKnown RBP8.47□□□□□ -1.05
HDAC9-218ENST00000456174 ALS2CR12Q96Q35 445 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 EBF2Q9HAK2 575 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 ZNF287Q9HBT7 754 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GOPCQ9HD26 462 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GOLGA6AQ9NYA3 693 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 RCOR1Q9UKL0 485 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TRPC6Q9Y210 931 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 SNED1Q8TER0 1413 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GOLGA6L7A0A1B0GV03 622 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 ZNF202O95125 648 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 RASA1P20936 1047 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 MCM3P25205 808 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 GUCY1A2P33402 732 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 CDK8P49336 464 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 PICALMQ13492 652 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 AOC3Q16853 763 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 THEMIS2Q5TEJ8 643 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 STRIP1Q5VSL9 837 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 MTHFD1LQ6UB35 978 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 C16orf86Q6ZW13 317 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TTLL6Q8N841 843 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 COG1Q8WTW3 980 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 CCDC12Q8WUD4 166 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-218ENST00000456174 TEKT1Q969V4 418 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 EHD4Q9H223 541 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 IL17RBQ9NRM6 502 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 SAMM50Q9Y512 469 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 PSME4Q14997 1843 aa8.47□□□□□ -1.05
HDAC9-218ENST00000456174 USP17L3A6NCW0 530 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms